Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2315 ATGGAGCCTATGGATATTGTTGCTAAATCAAAGGAAGATGCTTCGCTACCTAAAGCAACGATGACGAAAATTATTAAAGAGATGTTGCCTCCGGATGTGCGTGTTGCAAGAGATACCCAGGATTTGTTAATTGAATGTTGTGTAGAGTTCATAAACCTTGTCTCATCAGAGTCAAATGAAGTATGTAGCAGAGAGGAAAGAAGGACGATTGCACCTGAGCACGTATTGAAGGCTTTAGGGGTTCTTGGATTTGGCGAGTACATTGAGGAAGTTTATGCAGCTTATGAACAGCACAAGATGGAGACAGTGCAAGACTCTATAAAAGGTGCCAAGTGGAGCGGTGCAGCTGAGATGACTGAGGAACAAGCATTAGCGGAGCAGCAAAGGATGTTTGCAGAGGCTCGTGCTAGAATGAATGGAGGGACCATTACTTCCAATCAACCAGATGCTGACCAAAGTTTAGAGAACTAA 471 0.4352 MEPMDIVAKSKEDASLPKATMTKIIKEMLPPDVRVARDTQDLLIECCVEFINLVSSESNEVCSREERRTIAPEHVLKALGVLGFGEYIEEVYAAYEQHKMETVQDSIKGAKWSGAAEMTEEQALAEQQRMFAEARARMNGGTITSNQPDADQSLEN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2315 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 - -
Mal4g2315 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
Mal4g2315 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Mal4g2315 156 Gene3D Histone, subunit A 4 142 IPR009072 GO:0046982
Mal4g2315 156 Coils Coil 115 135 - -
Mal4g2315 156 SUPERFAMILY Histone-fold 12 143 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2315 Mal-Chr4 57312116 57315046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2315 1 152 CCAAT-DR1 Transcription Factor Family AT5G23090 79.221 4.73e-89 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mal4g2315 CBFD_NFYB_HMF 4.1e-21 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2315 K21751 - gmx:547635 281.952