Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2298 ATGGAGCAACAACGTGATGTACGAGATATTGTTGACGATAGCATAGTTTTGACCTTTCGTTGGAATTCTACCAGAAATCTTTATGAAATGTATCGGCACATGAGGGATGACAACCAAGCTCCACAAATTGAGGATTGGGACATGCGTCTTTATATGGGACACATCATTTTTCGTGAAAACAATAACTTAAGTGAACGTTTAAGAAGAGAAAACCCTGTAAGCACTAGGATTGAGAATGGAGCATCAAGTTCTATTTGTTCCATATGTCTTGAAGATATTTCTGTTGGGTTTGAAGTGATTCAACTGCCTAACCCATGTTGTCATATTTATCATGATGAGTGCATTATGAGGTGGCTCGGGAGGTCTAACACTTGCCCTTTGTGTCGCAGGCCTATCTCATAA 402 0.398 MEQQRDVRDIVDDSIVLTFRWNSTRNLYEMYRHMRDDNQAPQIEDWDMRLYMGHIIFRENNNLSERLRRENPVSTRIENGASSSICSICLEDISVGFEVIQLPNPCCHIYHDECIMRWLGRSNTCPLCRRPIS* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2298 133 PANTHER SI:CH211-59O9.10 70 132 - -
Mal4g2298 133 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Mal4g2298 133 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 133 IPR013083 -
Mal4g2298 133 SUPERFAMILY RING/U-box 85 132 - -
Mal4g2298 133 SMART ring_2 86 128 IPR001841 -
Mal4g2298 133 Pfam Ring finger domain 86 129 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2298 Mal-Chr4 56152828 56153229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2298 62 129 C3H Transcription Factor Family AT1G57730 43.478 2.79e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2298 - K11982 cam:101490108 155.221