Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2265 ATGGAGTCTTGGAATTTTGATCATGAAGATAAAGGGTATGTTTCAAATGACACACTTGGGAGAACCAAAGGTTCAATCTTAGGTTGGGATTTGAAAACCACATCTAGTTTTTTAGGTCAACAAAACATTGAAAATGACAATAATCAAGGTTTTGAGGAATTGGGTTTTCATGGAATGTTGGGAAAACAGTTGTCTAATGTTGATGATGTTGTTGGTAGCAAAATTGCTACTAGTAGTTCTTTTGTTATGGCTGCACCAAATGCATTTTCAGAAAAAGAACAACAACACTTCAATTCAAAGCATTCAAACTCAATAGGTGACACTAATGGTTGTAATTCACTCATTGATTTGAAGCTTGGTAGATTTGGTAATCATCGAGATGGAGTTGGTACAACATTTTCGAAGGGGACCACGATTTTGTTGTCGTCTGGATCGTCGACACCATCGAAGAGGGTGAGGTCTTCGGGGGTCCATTCTCAGATTTCTTACTGTCAAGTCTATGGATGTAATAAGGATCTGAGTGGTTGTAAAGATTATCACAAGAGGCATAAAGTTTGTGAGGTTCATTCAAAGACTTCTAAAGTAATAGTGAATGGAATTGAACAAAGGTTTTGTCAACAATGTAGTAGGTTTCATTTGCTGGCTGAATTTGATGATGGTAAGCGTAGCTGTCGTAAACGTCTTGCAGGCCATAATGAGCGTCGTAGAAAGCCACAAGTTGGTATTCATTCTGGAAGAGCTGGGAGGTTGCTTCAGTCATATGGGGATAGCAGATTCCAAAGAACCATGCTAACATCAGCATCTTTTATATGCCAAGATATACTCCCCAGTGAGGTCTTATCTTCTGAGAAATGTGGAAATAATAACTGGTGGAAACCGATAAAAGCCGAAGACGGAACCGGTTTTAGGCCTCTTTCTTCTATTCCTATTACAAATTCACATCCTCATTCAAGAACTCTGTTTCCTTCGTACAACAATAAACAATTTCCTTTTCTTCAAGAAAATGGTGCTTCATCTGCTACAGGAAGCATCTTCTGTGAAAACAATAGTCAATATCCTCCTATCCTTGGAGGCTCGAATTCCGGATCACAATCATTATATCAAGATACTTCCTTAAGAAGCGAAGACTTAAATGTTTTTGAAACAGAATCAACTGTTCAAGGATTATCGGGAGTATCAGACGGTGGTTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCTTCAAGCCAATCGTCAGGAATTCCCATGCCAAGTCATTTAGTCATTCCGAGAAGCCATGGCCATTATAGCATTAGTCATGTTTCTGAAAGTGGCATGTCAGATAGGTTTCCGTCTGAGTTAAATCCTACGGATGGAAGTCATCTTAGTCCTATATTGATATCAAACAATAATGAAATCGCCCATTTCGAAATGGCAAATGGGATTTTCCAAGGGTCGGATTTTGTCAACGTGAAAGACCGTCTTTCCTGTGAAGATGGCACGACCATTGACTTGCTTCAACTGTCGTCACAACTTCAGCGTGTCGAGCATCAGAGGCGAGCCTTGCAGGTGAAGCGAGAAAATGATTCTTCCTTCTCTCTCCGGATTACGTAA 1599 0.3996 MESWNFDHEDKGYVSNDTLGRTKGSILGWDLKTTSSFLGQQNIENDNNQGFEELGFHGMLGKQLSNVDDVVGSKIATSSSFVMAAPNAFSEKEQQHFNSKHSNSIGDTNGCNSLIDLKLGRFGNHRDGVGTTFSKGTTILLSSGSSTPSKRVRSSGVHSQISYCQVYGCNKDLSGCKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVGIHSGRAGRLLQSYGDSRFQRTMLTSASFICQDILPSEVLSSEKCGNNNWWKPIKAEDGTGFRPLSSIPITNSHPHSRTLFPSYNNKQFPFLQENGASSATGSIFCENNSQYPPILGGSNSGSQSLYQDTSLRSEDLNVFETESTVQGLSGVSDGGCALSLLSSQSQNSSSQSSGIPMPSHLVIPRSHGHYSISHVSESGMSDRFPSELNPTDGSHLSPILISNNNEIAHFEMANGIFQGSDFVNVKDRLSCEDGTTIDLLQLSSQLQRVEHQRRALQVKRENDSSFSLRIT* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2265 532 SUPERFAMILY SBT domain 163 242 IPR036893 GO:0003677|GO:0005634
Mal4g2265 532 Gene3D - 154 225 IPR036893 GO:0003677|GO:0005634
Mal4g2265 532 PANTHER 1 PROTEIN, PUTATIVE-RELATED 36 532 - -
Mal4g2265 532 ProSiteProfiles Zinc finger SBP-type profile. 161 238 IPR004333 GO:0003677
Mal4g2265 532 Coils Coil 500 520 - -
Mal4g2265 532 Pfam SBP domain 164 237 IPR004333 GO:0003677
Mal4g2265 532 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 36 532 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2265 Mal-Chr4 54748815 54752420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2265 62 280 SBP-box Gene Family AT1G69170 46.667 4.01e-50 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mal4g2265 SBP 5.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2265 - - gmx:100777766 738.413