Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2250 ATGGCATTGGAACTTGTGGGTGGAGCTTTCTTAGAGGCTGGTTTTGGTGCTTTGCTTGGAAAAATAGCTTATCCTGCAGTGGTTAAATTCTTTAAGAAAAGTAAAAGCAGTGACATGTTGCTCAGGAAGTTGAAGATCTCCTTGTTGTCCATTGATGCAGTGCTTAGTGATGCAGAGGAAAAACAACTGAGAAATGCATCTGTCAAGGAGTGGATGGAGGAGCTTAAAGAAGTTGTGTTTGATGCTGATGATCTAATGGATGAGATATGTACTTATGCAAAGGTAGGTGAGAACTCAACTACTTCTGTTAATTTGCATGATGCTGAAATTGAAGAGAAAGTGCAAGACATAATTGAAAGATTAGACTTGATCATAAAACAGAAAAATGTGCTTCAACTTCAAATAGTTAAAGAAGTAAAAATCCCAACAAAGATACCAACTTCATCTGTAGTTGGATCAAGTGATGTGTATGGTAGGGGTGATGATAAAGAGGCCTTAATGAAATTGCTATTTTCTGATGATGCAGAAGGTGAATGTAATATAAGTGTGATTCCTATAGTGGGCATGGGAGGTATTGGAAAAACCACCTTAGCTCAATTTGTTTACAATGATGAAAGAGTGCAGAAGGAATTTGATGTCAAAGCTTGGGTTTATGTGTCTGAGCAATTTGATGTTCTCAAGATTACAAAAACCCTTGTGGAAGAGATCACTTCTTGTAGTTGTAGAATTGAAGAGTTGAATTTACTCCAACAAGATTTGAAGAAAAGGTTGTTAAAGAAAAAGTTTTTGTTCATTTTAGATGATGTATGGAATCAAAACTACATAAGATGGGAAACTTTGAAGAATCCATTTGTGTATGGAGCTCCTGGAAGTAAGATTACTGTAACAACAAGAATCGCTCGTGTGGCATCAATTATGCAGACTGTTAAGCCTTATTATCTTTCAGAACTGTGTGATGATGATTGTTGGATGCTGTTTTCAAAACATGTGTTTGGATATGCAAATTCAAATGTTCACCAAAATTTAAGAAAGATTGGTAAACAAATAATTAAAAAGTGCAAAGGATTGCCTTTGGCGGTGAAGACACTTGCAGGACTTCTGAGATCTAAAGATGATACAAAGGAATGGAACAAAGTACTAAACAGTGAGATATGGGATTTGCAGGATGATGAGAGTAATATTCTCCCAGCTTTGAGATTAAGTTATCATTATCTTCCGTCACATGTAAAACGATGTTTTGCTTATTGTTCAATTTTTCCAAAAGATTATGAATTTGAGAAGGAGAAGTTGATCTTATTGTGGATGGCAGAAGGTTTACTACAACCATTGAGAAGACACAAGAGAATTGAAGAAGCTGGAGATGAGACATTTAGTGAGCTAGTGTCTAGATCGTTTTTTCAGCAATCGAAACGCAATAAGTTGTGTTTTGTAATGCACCATTTTGTAAATGATTTAGCTCAATTTGTATCTGGAAAATTTTCTGTCAGAGTAGAAGGCAATTATGACGAAGTAGAAGAAAGTGCTCGATATCTGCTGCATTTGATTGCACATAAATTCCCTGCTGTACATTGGAAGGCTATTGGTAAAGCTATTCACCTCAGAACCTTCATGGAATTAAGATTGGTCGATAAATCTGTGAGCTTTATTGATGAGATTCCACATGACTTGTTGATCAAGCTCAAGTGTATAAGGGTGTTGTCTTTGTCCGGCATCTATCATAAGGGGTTACCTGATTCAGTTAATGAACTAATACATCTTCGGTATCTAGATCTTTCTGGGGCTAAGATGAACGTGTTGCGGGAAAGCATTGGTGGTTTGTACAATTTGGAAACTTTGAAGCTAGTTGGATGTACTAACCTAAAAGAACTTCCTAAAGATTTCCATAAGTTAGTTAACCTGCGTTACTTAGATATTACTTGTACGAGTTTGAAATGGATGCCATTCCATATGAGTGCATTGAAAAACCTACAAAACCTAAGTGACTTTTTCATAGGAAAAGAATATGGATCTTCAATTGATGAACTAGGACAATTATCTGATTTACATGGATCACTGTTCATTCACAATATTGAACATGTTAGCTATGTGGATTCAGAAAAGGTCAAGTTGAATGAAAAGGAATTTCTTGAAAAGTTAATTTTGGAATGGGGTGAGAATGCTGATACTGACAATTCACAGCAAGAAAAAGACATACTAGACAGGTTACAACCCCATATAAATCTTAAAGAGCTTTCTATACATAACTACCTCGGGACAGAATTTCCTAATTGGGTCGGAGACTCTTCCTTCTGCAACTTGTTGGTAATGGAGCTTCACGGTAGCAAATATTGCTATAAACTACCTCCGCTTGGGCAACTTCCTTGTTTAAAAGAGCTACGAATTGCTAAATTCGATGGATTATCAAGCGTGGGGTCAGAGTTTTATGGGAATGGTTCTTTCGTTGTAACTGAGAGCTTTGGTTCGCTAGAAACTCTTAGGATTGAGAACATGTCAGCATGGGAGGATTGGCAGCATCCTGATGAGGCTAACAAAGCTTTTGCTGTACTGAAAGAACTTCATATAAATGGTTGTCCTAGATTGAAAAAAGATTTACCGATTAACCTTCCATCTTTGACATTACTTGTCATCAGAGATTGCAAAAGGCTCATTTCTTCACTTCCAACAACTTCTTCAGCTTTGAAGGTCATCAACATTGACAACTGTGAGAACTTTAAATTCCCGGCACGTGTAAGTCAGTTCCACCAGACACTCACATCTTTGTACTTACACAATAGCTTTGATTCACTTGAGCTATTGTCATTAGATATTCCCAACCTTAAGTCCCTGGATGTTTCTGGTTGTAAAAATCTAAAAGCACTTGCAGTTTCAGGGAAAATGAGACTCCGTCCTCCAATTCTTAACTCCCTTCGTTCCTTGTCCATAAGTAACTGTCCAAAGTTGGTATCCTTTCCAACAGAAGGATTCTTCGCCCCAAAGCTCACGTTGTTGAGTATTGACTACTGCGAGGAGCTCAAGTCCCTGCCGCCGAAAATGGACCAGCATATGCCAAGCTTGATAGAACTCCAACTATGGAGATGTCCACAACTTCAGCCAATTGAGAAGTGGCCTTCTGATTTGAGATCAGTCAGCATATGGAACTGTGACAAACTCATTGACCGTCAGTTAGAGTGGAATCAATCCAATCCCATCCATTTTTCAGACATGGCGATGTCTGGGGTTTTCACTGTCAAATCTGAAGATTGCTACTCAACAGTTGCCAGTACAACTCTTGGCTCTGGTAGGAAAGCATTATCAAGCTCTTCTCAGAAAAAATCATTTGCTAAAAGAGTATTCAGATGA 3339 0.3777 MALELVGGAFLEAGFGALLGKIAYPAVVKFFKKSKSSDMLLRKLKISLLSIDAVLSDAEEKQLRNASVKEWMEELKEVVFDADDLMDEICTYAKVGENSTTSVNLHDAEIEEKVQDIIERLDLIIKQKNVLQLQIVKEVKIPTKIPTSSVVGSSDVYGRGDDKEALMKLLFSDDAEGECNISVIPIVGMGGIGKTTLAQFVYNDERVQKEFDVKAWVYVSEQFDVLKITKTLVEEITSCSCRIEELNLLQQDLKKRLLKKKFLFILDDVWNQNYIRWETLKNPFVYGAPGSKITVTTRIARVASIMQTVKPYYLSELCDDDCWMLFSKHVFGYANSNVHQNLRKIGKQIIKKCKGLPLAVKTLAGLLRSKDDTKEWNKVLNSEIWDLQDDESNILPALRLSYHYLPSHVKRCFAYCSIFPKDYEFEKEKLILLWMAEGLLQPLRRHKRIEEAGDETFSELVSRSFFQQSKRNKLCFVMHHFVNDLAQFVSGKFSVRVEGNYDEVEESARYLLHLIAHKFPAVHWKAIGKAIHLRTFMELRLVDKSVSFIDEIPHDLLIKLKCIRVLSLSGIYHKGLPDSVNELIHLRYLDLSGAKMNVLRESIGGLYNLETLKLVGCTNLKELPKDFHKLVNLRYLDITCTSLKWMPFHMSALKNLQNLSDFFIGKEYGSSIDELGQLSDLHGSLFIHNIEHVSYVDSEKVKLNEKEFLEKLILEWGENADTDNSQQEKDILDRLQPHINLKELSIHNYLGTEFPNWVGDSSFCNLLVMELHGSKYCYKLPPLGQLPCLKELRIAKFDGLSSVGSEFYGNGSFVVTESFGSLETLRIENMSAWEDWQHPDEANKAFAVLKELHINGCPRLKKDLPINLPSLTLLVIRDCKRLISSLPTTSSALKVINIDNCENFKFPARVSQFHQTLTSLYLHNSFDSLELLSLDIPNLKSLDVSGCKNLKALAVSGKMRLRPPILNSLRSLSISNCPKLVSFPTEGFFAPKLTLLSIDYCEELKSLPPKMDQHMPSLIELQLWRCPQLQPIEKWPSDLRSVSIWNCDKLIDRQLEWNQSNPIHFSDMAMSGVFTVKSEDCYSTVASTTLGSGRKALSSSSQKKSFAKRVFR* 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2250 1112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 416 IPR027417 -
Mal4g2250 1112 PRINTS Disease resistance protein signature 934 950 - -
Mal4g2250 1112 PRINTS Disease resistance protein signature 183 198 - -
Mal4g2250 1112 PRINTS Disease resistance protein signature 353 367 - -
Mal4g2250 1112 PRINTS Disease resistance protein signature 256 270 - -
Mal4g2250 1112 PANTHER OS05G0414200 PROTEIN 33 989 - -
Mal4g2250 1112 Gene3D - 136 310 IPR027417 -
Mal4g2250 1112 Pfam Rx N-terminal domain 32 98 IPR041118 -
Mal4g2250 1112 Gene3D - 17 132 - -
Mal4g2250 1112 Gene3D Ribonuclease Inhibitor 937 1073 IPR032675 -
Mal4g2250 1112 Gene3D - 317 400 IPR042197 -
Mal4g2250 1112 PANTHER DISEASE RESISTANCE PROTEIN RP 33 989 IPR044974 GO:0006952
Mal4g2250 1112 SUPERFAMILY L domain-like 916 1057 - -
Mal4g2250 1112 SUPERFAMILY L domain-like 533 950 - -
Mal4g2250 1112 Gene3D Ribonuclease Inhibitor 529 924 IPR032675 -
Mal4g2250 1112 Pfam NB-ARC domain 163 402 IPR002182 GO:0043531
Mal4g2250 1112 Gene3D - 401 488 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2250 Mal-Chr4 54465909 54469247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2250 180 647 WRKY Transcription Factor Family AT5G45050 22.348 1.33e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2250 - - ccaj:109812375 1209.51