Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2241 ATGTCTCACAGGAAGTTCGAGCACCCAAGACACGGTTCATTGGGATTTCTCCTAAGGAAGTGTGTTGCTTGTCACAGAGGAAAAGTGAAGGCTTTCCCTAAGGATGACCCAACCAAGCCACCAAAGCTATCTGCCTTCTTGGGTTACAAGGCTGGTATGACCCACATTGCCAGAGAAGTCGAGAAGCCTGGATCCAAACTTCACAAGAAGGAGACTTGTCAGCCTGTGACAATCATTGAGACCCCTCCAATGGTTATTGTTGGTGTTGTGGGTTATGTGAAAATTCCCCGTGGTCTCCAAACATTGAACAATGTATGTACTCAACATTTGAGTGAAGAAATTAAGCGTAGGTTCTACAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCAGCAAGTACTCAAAGCAGTATGAAAGTGATGAGGGAAAGAAAAACATTCAGACCCAGCTTGAGAAACTCAAGAAGTATGCAACTGTTATCTGTGTGTTAGCTTACACTCAGATAAGGAAAATGAAGGGATTGAAGCAGAAGAAGGCCCATATCATGGAGATTCGGGTCAATGGTGGTACTATTGCACAGAAGGTGGACTTTGCACACAGTTTCTTTGAGAAGCAGGTTCATATTGATGTTGTGTTCGAGAAGGATAAAATGATTGACACCATTGGAGTGACTAAGGGTAAGGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTTACCCGCCTTCCTCGTAAGACTCATAGGGGTTTGAGGAAGGTTGCATGTATTGGAGCTTGGCATCCTGCTAGAGTTTCTTTCACTTTTGCAAAGGCTGAGACCCATGATGCCCAGACTGAGTTTGATAGGATTAAGAAAGACATCACCCCAATGGGTGGTTTCCCCCATTACGGTATTGTCAAGCAGGATTATCTGATGATCAAGGGAGGTTGTGTTGGTCCCAAGAATAGGGTTATTACTCTACGCCAATCCCTTCTTAAGCAGACTTCTCGTCTTGCTCTTGAGAATATCAAACTCAAGTTTATCGATACCTCTTCCAAGTTTGGACATGGTCGTTTCCAGACAACATCAAAGAGGCAAAAGTTCCATGGACACCTCAAAGCTTAA 1101 0.4405 MSHRKFEHPRHGSLGFLLRKCVACHRGKVKAFPKDDPTKPPKLSAFLGYKAGMTHIAREVEKPGSKLHKKETCQPVTIIETPPMVIVGVVGYVKIPRGLQTLNNVCTQHLSEEIKRRFYKNWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVICVLAYTQIRKMKGLKQKKAHIMEIRVNGGTIAQKVDFAHSFFEKQVHIDVVFEKDKMIDTIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTFAKAETHDAQTEFDRIKKDITPMGGFPHYGIVKQDYLMIKGGCVGPKNRVITLRQSLLKQTSRLALENIKLKFIDTSSKFGHGRFQTTSKRQKFHGHLKA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2241 366 SUPERFAMILY Translation proteins 4 347 IPR009000 -
Mal4g2241 366 Gene3D Translation factors 272 362 - -
Mal4g2241 366 Gene3D Translation factors 44 225 - -
Mal4g2241 366 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 270 IPR045077 GO:0003735|GO:0005840|GO:0006412
Mal4g2241 366 Gene3D Ribosomal protein L3, domain 3 1 271 IPR044892 -
Mal4g2241 366 PANTHER 60S RIBOSOMAL PROTEIN L3-1 1 270 - -
Mal4g2241 366 ProSitePatterns Ribosomal protein L3 signature. 212 235 IPR019926 -
Mal4g2241 366 PANTHER 60S RIBOSOMAL PROTEIN L3-1 270 366 - -
Mal4g2241 366 Gene3D - 83 207 - -
Mal4g2241 366 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 270 366 IPR045077 GO:0003735|GO:0005840|GO:0006412
Mal4g2241 366 Pfam Ribosomal protein L3 1 270 IPR000597 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2241 Mal-Chr4 54260504 54261673 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2241 1 364 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 74.677 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2241 K02925 - gmx:100819132 616.69