Home
Resource
Genome
JBrowse
Transcriptome
Metabolomics
Pan-genome
External database links
Search
Annotation
Pathway
Duplication type
Transposable elements
Regulatory proteins (RPs)
N6-methyladenosine (m6A)
Browse
Syn-based OGs
Gene-families
Synteny
Syn-Blocks
Syn-Dotplots
Deco-Alignments
Pvu_syntenic
Vvi_syntenic
WGDs- Genes
Anc-Genome
Anc-Reference
Tools
All tools
Genome browsing and annotation
Jbrowse
ShinyCircos
Interproscan
iTAK
Dupgen finder
Homology search and alignment
Bl-match
Seq-fatch
Blast
Diamond
Bi-visualazition
Synteny inference
MCScanX
ColinearScan
Synviso
Syn-blocks-stat
B-Dotter
BB-Dotter
BK-Dotter
Evaluation of nucleotide mutation
ParaAT
KaKs calculator
NG-KaKs-Cal
Paleogenome fractionation
Paleo-gene identifier
Syn-deco generator
Paleo-gene_RI
Paleo-gene_RII
P-index-calculator
Multi-syn-phytre
Gene structure and evolution
Codonw
Cpgfinder
MEME
GSDS
Hmmer
Pfam
FastTree
IQ-Tree2
Multigene-align
Heatmap
Lollipop
Gmapping
GF-Circos
Other auxiliary tools
GC-calculator
Seqlenth-calculator
Genstr-counter
Gam-Calculator
SAF-converter
BDI-finder
BDI-deduplicator
BDI-extractor
BDI-combiner
Seq-corrector
Subtree-splitter
Sptaxon-accessor
SS-extractor
WinO-WGDI
Block_run
KaKs calculate
Blast dotplot
Ks dotplot
Block_info
Correspondence
Statistics
Overview
Phylogenetic tree
Identification of polyploidy
Bar chart
Heatmap
Gene function annotation
Functional genes
Transcription factor
N6-methyladenosine(m6A)
Bar chart
Heatmap
Transposable elements
Documentation
Platform Manual
Pipeline flow examples
L-Wikipedia
Species introduce
Literatures
Common pests
Diseases
Economic value
Planting methods
About
Submission
Community
Contact
Gene search
Sequence information
Show
10
25
50
100
entries
Search:
Select
Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Mal4g2241
ATGTCTCACAGGAAGTTCGAGCACCCAAGACACGGTTCATTGGGATTTCTCCTAAGGAAGTGTGTTGCTTGTCACAGAGGAAAAGTGAAGGCTTTCCCTAAGGATGACCCAACCAAGCCACCAAAGCTATCTGCCTTCTTGGGTTACAAGGCTGGTATGACCCACATTGCCAGAGAAGTCGAGAAGCCTGGATCCAAACTTCACAAGAAGGAGACTTGTCAGCCTGTGACAATCATTGAGACCCCTCCAATGGTTATTGTTGGTGTTGTGGGTTATGTGAAAATTCCCCGTGGTCTCCAAACATTGAACAATGTATGTACTCAACATTTGAGTGAAGAAATTAAGCGTAGGTTCTACAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCAGCAAGTACTCAAAGCAGTATGAAAGTGATGAGGGAAAGAAAAACATTCAGACCCAGCTTGAGAAACTCAAGAAGTATGCAACTGTTATCTGTGTGTTAGCTTACACTCAGATAAGGAAAATGAAGGGATTGAAGCAGAAGAAGGCCCATATCATGGAGATTCGGGTCAATGGTGGTACTATTGCACAGAAGGTGGACTTTGCACACAGTTTCTTTGAGAAGCAGGTTCATATTGATGTTGTGTTCGAGAAGGATAAAATGATTGACACCATTGGAGTGACTAAGGGTAAGGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTTACCCGCCTTCCTCGTAAGACTCATAGGGGTTTGAGGAAGGTTGCATGTATTGGAGCTTGGCATCCTGCTAGAGTTTCTTTCACTTTTGCAAAGGCTGAGACCCATGATGCCCAGACTGAGTTTGATAGGATTAAGAAAGACATCACCCCAATGGGTGGTTTCCCCCATTACGGTATTGTCAAGCAGGATTATCTGATGATCAAGGGAGGTTGTGTTGGTCCCAAGAATAGGGTTATTACTCTACGCCAATCCCTTCTTAAGCAGACTTCTCGTCTTGCTCTTGAGAATATCAAACTCAAGTTTATCGATACCTCTTCCAAGTTTGGACATGGTCGTTTCCAGACAACATCAAAGAGGCAAAAGTTCCATGGACACCTCAAAGCTTAA
1101
0.4405
MSHRKFEHPRHGSLGFLLRKCVACHRGKVKAFPKDDPTKPPKLSAFLGYKAGMTHIAREVEKPGSKLHKKETCQPVTIIETPPMVIVGVVGYVKIPRGLQTLNNVCTQHLSEEIKRRFYKNWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVICVLAYTQIRKMKGLKQKKAHIMEIRVNGGTIAQKVDFAHSFFEKQVHIDVVFEKDKMIDTIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTFAKAETHDAQTEFDRIKKDITPMGGFPHYGIVKQDYLMIKGGCVGPKNRVITLRQSLLKQTSRLALENIKLKFIDTSSKFGHGRFQTTSKRQKFHGHLKA*
367
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Annotation information
Show
10
25
50
100
entries
Search:
Select
Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Mal4g2241
366
SUPERFAMILY
Translation proteins
4
347
IPR009000
-
Mal4g2241
366
Gene3D
Translation factors
272
362
-
-
Mal4g2241
366
Gene3D
Translation factors
44
225
-
-
Mal4g2241
366
PANTHER
60S RIBOSOMAL PROTEIN L3-RELATED
1
270
IPR045077
GO:0003735|GO:0005840|GO:0006412
Mal4g2241
366
Gene3D
Ribosomal protein L3, domain 3
1
271
IPR044892
-
Mal4g2241
366
PANTHER
60S RIBOSOMAL PROTEIN L3-1
1
270
-
-
Mal4g2241
366
ProSitePatterns
Ribosomal protein L3 signature.
212
235
IPR019926
-
Mal4g2241
366
PANTHER
60S RIBOSOMAL PROTEIN L3-1
270
366
-
-
Mal4g2241
366
Gene3D
-
83
207
-
-
Mal4g2241
366
PANTHER
60S RIBOSOMAL PROTEIN L3-RELATED
270
366
IPR045077
GO:0003735|GO:0005840|GO:0006412
Showing 1 to 10 of 11 entries
Previous
1
2
Next
Select All
Download Selected Rows
Duplication type information
Show
10
25
50
100
entries
Search:
Select
Gene
Chromosome
Start
End
Duplicated_type
Mal4g2241
Mal-Chr4
54260504
54261673
Dispersed
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Functional genes information
Show
10
25
50
100
entries
Search:
Select
Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Mal4g2241
1
364
Cytoplasmic Ribosomal Protein Gene Family
AT1G43170
74.677
0.0
576
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Pathway information
Show
10
25
50
100
entries
Search:
Select
Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Mal4g2241
K02925
-
gmx:100819132
616.69
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows