Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2229 ATGGAGGTTGATTTTAATGAGAAGCTTGTGGACAGAATGGAAGAGCAAATGAAACGGCTTGAAGCCATTTTCAAAGCTAAACAGAATCAGAAGTGGCAACACTGTCACACTCCAATTCAGATAACTAATTTTGCAGGAGAATTGTTAACAAAAGCTGATAATGTTCAAGATGATGAAAGCTGGATGACTGTGGAAGAGGTTGAAGGAGCAACATTGGAATGCGAGAAAACACACAAAAGGAAGGCTGCCTGTTTAGTTGCCAATGCATTGGGGATGGTGACATCCGGCGTTGCGGGCCGTACTAGAAACTTCTTTGATTGTAATATATGTTTGGAACAGGCAAATGATCCTGTTTTAACATGTTGTGGTCACTTGTTTTGTTGGGAATGCTTCTATCAATTGTCATATGCTTATTCAAATGCTAAAGAGTGCCCAGTTTGTGAAGGAGAAGTACTTGACACCGACATCATCCCAGTTTATGGAAATGGAATGGTTGATGATATTAGCCGGTTGGAATTGAAAGAAACTGGTTTGAGAGTTCCTGATCGACCTAATGCACCTAGAGTTGAAAGTACTAGGCAGCGGCACAGAACACGCACCGTTGCTTCTGTAAACCAGGATTTGTTGTTGTTTGGTAACTTTGGTGGATTAGAAGAGCCAGATCCGATGCAATTCCCGAGTATTTCCACCGATTGA 696 0.4167 MEVDFNEKLVDRMEEQMKRLEAIFKAKQNQKWQHCHTPIQITNFAGELLTKADNVQDDESWMTVEEVEGATLECEKTHKRKAACLVANALGMVTSGVAGRTRNFFDCNICLEQANDPVLTCCGHLFCWECFYQLSYAYSNAKECPVCEGEVLDTDIIPVYGNGMVDDISRLELKETGLRVPDRPNAPRVESTRQRHRTRTVASVNQDLLLFGNFGGLEEPDPMQFPSISTD* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2229 231 Pfam RING-type zinc-finger 107 145 IPR027370 -
Mal4g2229 231 SMART ring_2 107 147 IPR001841 -
Mal4g2229 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 161 IPR013083 -
Mal4g2229 231 ProSiteProfiles Zinc finger RING-type profile. 107 148 IPR001841 -
Mal4g2229 231 Coils Coil 3 30 - -
Mal4g2229 231 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 8 201 - -
Mal4g2229 231 SUPERFAMILY RING/U-box 96 157 - -
Mal4g2229 231 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 8 201 IPR045103 GO:0005783|GO:0006511|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2229 Mal-Chr4 53422471 53423166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2229 98 193 C3H Transcription Factor Family AT3G58030 51.546 1.27e-27 107