Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2212 ATGGATTGCAGATTTGAGACCGCAGAAACTCGCAGGAACAAGTGTGCAGCATGCTACAGGCAGTTCAACAAAGTGGAGCACCTAGTGGATCACATGAAGATCTCTTACCATTCTGCTCATGAACCAACCTGTGGCATTTGCAGGAAACATTGCAGATCCTTTGAGTCTCTAAGGGAACATCTTATAGGTCCATTGCCAAAACAAGAATGCAGAGAAATCTTTGCCAACCGAGGGTGCAAGTTTTGCTTGAAAGTCCTTGACAGCCCTAACTCTCGCAGGATCCACCAACAAAAGTGCCAACTCTCTGGCTTAAGTGGAATATGTGGTCGCTTTTCGAACTTGGGAATTCGGGATAATTTAACGATTGGTGGAGGAAGAGGACCACAAGTAGTTGCACTAGCTTGCAAAATGGTGGGAGGTGGAAGTGATGGCTCATTGGATCTATGTGCAAGAGTTTGTTTAACAGATGAAAATGAAAACATAATCTTCCATTCTTATGTCATTCCACCAATTCCAATCACAAATTACAGGTATGAGACAACAGGTATTAGACATGAATATTTAAGGGATGCAATGCCATTGAAAGTAGTTCAAAGGAAGATTCAAGATTTCCTTTGTAATGGAGAACCTATGTGGACAATTCGTTCAAGAGGTGGAAAAGCTAGGATTCTTGTGGGTCATGGTTTAGATCATGACCTTGCATCTTTGCAAATTGAGTATCCAACACCAAAAATAAGGGACACTGCAAAATACCCTCCACTCATGAAAACCAGCAAGCTCAGCAACTCACTCAAGTACTTAACACAAGCATATCTTGGGTATGACATTCAAACAGGGATACAAGATACTTATGATGATTGTGTTGCAGCAATGAGACTCTACATGAGAATGAGAAACCAAAACCACAAAATAGAAGATTACCCTTTGGCATCTGATCCTCAAAACAGGAACAATTTTGCTTCATGGAGGCAAAGTGAGCTTGAAAGAATGAGTCCTGAACAAATGCTAGAAATCTCAAGGTCTGACTACTATTGCTGGTGCATGGATCCATGA 1053 0.4141 MDCRFETAETRRNKCAACYRQFNKVEHLVDHMKISYHSAHEPTCGICRKHCRSFESLREHLIGPLPKQECREIFANRGCKFCLKVLDSPNSRRIHQQKCQLSGLSGICGRFSNLGIRDNLTIGGGRGPQVVALACKMVGGGSDGSLDLCARVCLTDENENIIFHSYVIPPIPITNYRYETTGIRHEYLRDAMPLKVVQRKIQDFLCNGEPMWTIRSRGGKARILVGHGLDHDLASLQIEYPTPKIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQTGIQDTYDDCVAAMRLYMRMRNQNHKIEDYPLASDPQNRNNFASWRQSELERMSPEQMLEISRSDYYCWCMDP* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2212 350 ProSitePatterns Zinc finger C2H2 type domain signature. 15 37 IPR013087 -
Mal4g2212 350 PANTHER OS02G0709000 PROTEIN 6 349 - -
Mal4g2212 350 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 42 IPR013087 -
Mal4g2212 350 CDD REX4_like 131 294 IPR037431 GO:0006364|GO:0008408
Mal4g2212 350 SMART exoiiiendus 129 303 IPR013520 -
Mal4g2212 350 Pfam Exonuclease 146 294 IPR013520 -
Mal4g2212 350 Gene3D - 128 312 IPR036397 GO:0003676
Mal4g2212 350 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 6 349 - -
Mal4g2212 350 SUPERFAMILY Ribonuclease H-like 143 301 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2212 Mal-Chr4 52964905 52967210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2212 1 349 C2H2 Transcription Factor Family AT3G27970 74.859 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2212 - - gmx:100813973 642.499