Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2177 ATGGGAACACCTGTGAACATCATTGTTGGATCACAGGTTTGGATTGAGGATCCTGAGGTTGCATGGATTGATGGTGAGGTGACTGAAATCAAAGGCACAAATGCCACTGTCATTACCACAGATGGAAAAACTGTTGTGGCAGAAATTTCCGGTATTTACCCTAAAGATACAGAAGCACCACCTGCAGGGGTTGATGACATGACAAAGCTCGCATACCTCCACGAACCCGGAGTCTTGTATAACCTTTTGTGTCGCTTTTCTCTCAACGAAATATATACATATACAGGGAATATCTTGATCGCGGTGAATCCTTTTCGAAGACTGCCGCACTTGTATGACAGCCATATGATGGAGCAGTACAAAGGAGCGGCATTTGGAGAGCTTAGTCCTCATCTTTTTGCTGTAGCAGACACTTGTTACAGGGCAATGATGAATGAAAATGGAAGTCAATCCATTTTGGTTAGCGGAGAAAGTGGAGCTGGTAAAACCGAGACGACTAAAATGCTTATGAGATATCTAGCTTTCATGGGAGGTAGATCGAATACCGAAGGAAGGACTGTTGAACAACAGGTTTTGGAGTCCAATCCAGTGTTGGAAGCATTTGGAAATGCCAAAACTGTCAAAAACAACAATTCAAGTCGTTTTGGTAAGTTTGTTGAAATTCAATTTGACAAAAATGGGAAAATTTCTGGAGCTGCAATCCGTACGTATCTCCTTGAAAGATCTCGAGTTTGCCAAGTTTCTGACCCGGAGAGAAACTATCATTGCTTTTACATGCTTTGTGCAGCTCCACAAGAGGATGTCAAGAAATACAAGTTAGGGGATCCAAGGAAATTTCGCTATCTTAATCAATCAAGCTGTTATGAAGTGTCAAATGTAGATGATGCAAAAGAATACTTGGAGACAAGAAATGCAATGGATATTGTAGGCATCAACCAGGATGAGCAGGATGCTATCTTTCGAGTCGTAGCTGCAATCCTTCATCTTGGAAACATTGACTTCGTCAAAGGGAATGAATTTGATTCTTCCAAATTGAAAGATGACAAATCACTCTACCACCTTCGAACAGTTGCCGAGTTATTCATGTGTGATGAGAAATCACTGGAAGACTCACTTTGCCAACGCGTAATTGTTACACCTGATGGCAACATTACAAAACCACTAGACCCGGAAGCAGCTTCTTTGAGTCGAGATGCTTTGGCAAAGACCGTGTACTCCAGATTGTTTGATTGGATTGTGGATAAGATTAACAGTTCAATTGGTCAAGATTCTAATGCAGTAAGCCTAATAGGAGTCCTTGACATTTATGGATTTGAAAGCTTCAAAATCAACAGTTTTGAGCAACTGTGCATCAACCTAACAAATGAGAAGTTGCAACAACATTTTAATCAGCATGTATTCAAGATGGAGCAAGAAGAGTACACAAAGGAGGAAATTAATTGGAGCTATGTAGAATTTGTTGATAATCAGGATGTTCTTGATCTTATTGAGAAGAAACCTGGAGGAATTATTGCTCTTCTTGATGAAGCATGCATGTTCCCTAAATCTACTCATGAGACTTTTGCACAAAAGATGTACCAAACATACAAAGGACACAAGCGATTCACCAAGCCAAAACTTTCTCGAACAGACTTCATAGTTAATCACTATGCCGGAGATGTCACATACCAAGCAGATTATTTTCTTGATAAGAATAAAGATTATGTCGTAGCAGAACATCAAGCTCTTTTGTGTGCTTCAAAGTGCACATTTGTTGCTAATCTATTTCCTCCTTTACCAGAGGAAACATCAAAGCAATCTAAATTCTCTTCCATTGGCTCACAGTTTAAGCAACAACTGCAATCTCTCATGGAGACACTAAGCACCACAGAACCACATTACATAAGGTGCGTGAAACCAAATACAGTTTTGAAGCCAGGAATATTTGAGAACTTCAATGTCTTAAACCAGTTAAGATGTGGGGGAGTACTTGAGGCAATTAGGATAAGTTGTGCTGGATATCCAACTAAAAGAACATTTGAAGAGTTCCTTGATCGATTTGGAATGCTAGCTCCCGATGTCCTTGACGGATCCGATGAGAAAAAGGCATCTATTGCAATCTGTGATAAGATGGGATTAAAAGGTTATCAAATGGGAAAAACAAAGGTATTTCTCAGAGCTGGTCAGATGGCTGAGTTAGATGCCCGAAGAGCCGAAGTCTTAGCTAAAGCAGCTAGACTCATACAGAGACAAATTCGAACACATTTAGCCCGAAAAGAGTTCATCACCATGAAAAAGGCTACAATTCATATGCAGAAGATTTGGAGAGCAAAACTTGCTCGGGAATTATTTGATGATATGAGGAGAGAAGCAGCTTCTATCCGGATACAGAAACATGCGCCATCAGCTATTGTTATTCAATCAGGGTTGAGAGCAATAGCTGCACGGAACGAATTTAGGTACCGAAGAAGAACAAAGGCTTCAATCAAAATTCAGACACAATGGAGAAAAGTTCAAGCTCTTTGTAATTACAAACAGAAGAAGAAATCAACTGTTACACTTCAATGTCTGTGGAGAGCTAAAGTTGCACGAAAAGAGCTCAGAAAGCTTAAAATGGCTGCAAGGGAAACTGGGGCACTTAAGGAAGCAAAAGACAAATTAGAGAAACGTGTTGAGGAGCTTACATGGAGACTAGATATTGAAAAGCACATGAGGGTTGACCTTGAAGAAGCAAAGGGGCAAGAGATTTCGAAGTTACAAACTGCATTACAAGAAATGCAAGGTCAGCTAGATGAAGCTCATGCTGCAATTATACATGAAAAAGAAGCTGCAAAACTAGCAATTGAACAAGCACCACCAGTAATAAAAGAGGTACCTGTTGTGGATAATACCAAGCTGGAGTTACTCACAAATAAAAATGAGGAGCTGGAGAGTGAAGTAGAAGAGCTGAAAAAAAAGATCAAAGAATTTGAAGAAAGGTACATGGAAATTGAAAAGGAGAATCAAACAAGGCTGAAAGAGGCAGAAGAAGCACAGAATAAAGCTACACAACTTCAGGAGACTATTGAAAGCCTCAAGGAACAAATAGCAAATTTAGAATCAGAGAATGAATGTCTAAGGAGCCAGGCAGCAGCTGTTGTAGAACAGAAAGTTCATCCAGAAAAAATAGAAACGAATCAGGAGGTTTCTGTTGTACAACAGATTCAACCAAGAGCTATTGCAGATAATGTGACAACACAAGTCAAGGAAAGTCATGATGCATTGCTCAAGTGTCTTATGGAAGATAAGCGTTTTGAGAAAAACAGACCAGCAGTTTCTTGTATTGTTTATAAAGCACTTCTTCATTGGAGATCCTTTGAAGCAGAGAAGACACATATATTCGATAAAATCACTCACACGATCCGAACATCTATAGAGAGTCAAGAAGGAATCAATGATCTAGCATATTGGCTTTCAACAACATCAACTCTTCTGTTTTATCTTCACTGCACACTCAAAGTCAGCAACAATACAACTAAGGCATTATCGCGTAACCGAAACTCACCTGCCACACTATTTGGAAAAATGGCACAAGGTTTACGTTCATCTTCAATGGGCATTGGGATATCAAGTGGTTACAGTGGAATGGTGGAAAAGCCAAATGAGCAATCTAAAGTGGAAGCCAAGTACCCTGCTATTCTATTTAAGCAACACTTAACTGCATATGTGGAGAAGATATATGGAATGATCCGTGATAGTTTGAAGAAAGAGATTAGTCCATTCTTAAATCTTTGTATTCAGGCACCAAGATCCATAAGAACCAGATCAACAAGAGGGTCATCCAGAAACATCCATTCAAATATAGTTGCAAAACAACAAGCATTGCATATGCACTGGAAAGGAATTGTCAGCAAGTTAGATCATGCCTTGAATATATTGTCTCACAACTATGTAAGCATGAATGCGTCTCCTAAATTATTCGCTTAG 3945 0.3952 MGTPVNIIVGSQVWIEDPEVAWIDGEVTEIKGTNATVITTDGKTVVAEISGIYPKDTEAPPAGVDDMTKLAYLHEPGVLYNLLCRFSLNEIYTYTGNILIAVNPFRRLPHLYDSHMMEQYKGAAFGELSPHLFAVADTCYRAMMNENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSNTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPQEDVKKYKLGDPRKFRYLNQSSCYEVSNVDDAKEYLETRNAMDIVGINQDEQDAIFRVVAAILHLGNIDFVKGNEFDSSKLKDDKSLYHLRTVAELFMCDEKSLEDSLCQRVIVTPDGNITKPLDPEAASLSRDALAKTVYSRLFDWIVDKINSSIGQDSNAVSLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFTKPKLSRTDFIVNHYAGDVTYQADYFLDKNKDYVVAEHQALLCASKCTFVANLFPPLPEETSKQSKFSSIGSQFKQQLQSLMETLSTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDVLDGSDEKKASIAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEVLAKAARLIQRQIRTHLARKEFITMKKATIHMQKIWRAKLARELFDDMRREAASIRIQKHAPSAIVIQSGLRAIAARNEFRYRRRTKASIKIQTQWRKVQALCNYKQKKKSTVTLQCLWRAKVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLDIEKHMRVDLEEAKGQEISKLQTALQEMQGQLDEAHAAIIHEKEAAKLAIEQAPPVIKEVPVVDNTKLELLTNKNEELESEVEELKKKIKEFEERYMEIEKENQTRLKEAEEAQNKATQLQETIESLKEQIANLESENECLRSQAAAVVEQKVHPEKIETNQEVSVVQQIQPRAIADNVTTQVKESHDALLKCLMEDKRFEKNRPAVSCIVYKALLHWRSFEAEKTHIFDKITHTIRTSIESQEGINDLAYWLSTTSTLLFYLHCTLKVSNNTTKALSRNRNSPATLFGKMAQGLRSSSMGIGISSGYSGMVEKPNEQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSIRTRSTRGSSRNIHSNIVAKQQALHMHWKGIVSKLDHALNILSHNYVSMNASPKLFA* 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2177 1314 Gene3D - 439 623 - -
Mal4g2177 1314 PANTHER MYOSIN 1056 1313 - -
Mal4g2177 1314 PANTHER MYOSIN 20 1042 - -
Mal4g2177 1314 Pfam Myosin N-terminal SH3-like domain 10 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mal4g2177 1314 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 785 IPR027417 -
Mal4g2177 1314 ProSiteProfiles IQ motif profile. 734 761 IPR000048 GO:0005515
Mal4g2177 1314 ProSiteProfiles IQ motif profile. 792 821 IPR000048 GO:0005515
Mal4g2177 1314 SMART iq_5 791 813 IPR000048 GO:0005515
Mal4g2177 1314 SMART iq_5 756 778 IPR000048 GO:0005515
Mal4g2177 1314 SMART iq_5 733 755 IPR000048 GO:0005515
Mal4g2177 1314 SMART iq_5 839 861 IPR000048 GO:0005515
Mal4g2177 1314 SMART iq_5 816 838 IPR000048 GO:0005515
Mal4g2177 1314 CDD MYSc_Myo11 76 719 IPR036018 -
Mal4g2177 1314 Gene3D - 252 310 - -
Mal4g2177 1314 Pfam IQ calmodulin-binding motif 759 776 IPR000048 GO:0005515
Mal4g2177 1314 Pfam IQ calmodulin-binding motif 842 861 IPR000048 GO:0005515
Mal4g2177 1314 Pfam IQ calmodulin-binding motif 736 754 IPR000048 GO:0005515
Mal4g2177 1314 Coils Coil 909 929 - -
Mal4g2177 1314 Gene3D - 732 788 - -
Mal4g2177 1314 Gene3D - 816 868 - -
Mal4g2177 1314 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Mal4g2177 1314 SMART MYSc_2a 56 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g2177 1314 ProSiteProfiles Dilute domain profile. 1121 1314 IPR002710 -
Mal4g2177 1314 Gene3D - 667 729 - -
Mal4g2177 1314 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 794 869 IPR027417 -
Mal4g2177 1314 Gene3D Kinesin motor domain 65 662 IPR036961 -
Mal4g2177 1314 PANTHER MYOSIN-12 1056 1313 - -
Mal4g2177 1314 Pfam Myosin head (motor domain) 64 719 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g2177 1314 ProSiteProfiles Myosin motor domain profile. 62 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g2177 1314 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g2177 1314 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g2177 1314 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g2177 1314 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g2177 1314 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mal4g2177 1314 Coils Coil 723 743 - -
Mal4g2177 1314 Coils Coil 863 897 - -
Mal4g2177 1314 ProSiteProfiles IQ motif profile. 840 869 IPR000048 GO:0005515
Mal4g2177 1314 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mal4g2177 1314 PANTHER MYOSIN-12 20 1042 - -
Mal4g2177 1314 Coils Coil 959 1042 - -
Mal4g2177 1314 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2177 Mal-Chr4 51392233 51401844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2177 116 1313 Myosins gene family AT2G31900 70.532 0.0 1823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2177 K10357 - gmx:100817933 2261.11