Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2162 ATGAACAATTATCACCTAGGAGATGAAAAGGATCAGCAGTATCAAAAAAAGAGGAAATCTTATGGCGAAGCCTCGACCAATTTGAAGACATCAAGAAGAAGATTATGCAGCAACAAAAATGAAGAAGAGAGAAACAACAACAAAGGATCAGTCTCCACAACACTAAAGCTTTACGACGATCCATGGAAAATCAAAAAGACGCTGACCGAAAGTGATCTAGGAATCTTGAGCAGACTCTTGTTGGCTGCAGATTTAGTAAAGAAACAAATTCTACAGGTGTTGGATGTTGATGAGGCGAAAGCCGCTGAGACTGAGGAAGGTTCAGCGGTAAATGTTTGGGACATGGAAACAAAGTCCATGCACGAACTTGTTCTAAAGCGATGGTCTTCATCCAAGAGCTATGTTCTTATTGGTAAGTGGAACCAGGATTTCGTGAGAAGAAGAGAGCTTAGGAAAGGTGATGAGATTGGATTTCAATGGGATCCTTTTAACCGTGCTTTCAATTTTTGTGTTCTTAAACGGGCTATGATGCCGAGTTAA 540 0.4056 MNNYHLGDEKDQQYQKKRKSYGEASTNLKTSRRRLCSNKNEEERNNNKGSVSTTLKLYDDPWKIKKTLTESDLGILSRLLLAADLVKKQILQVLDVDEAKAAETEEGSAVNVWDMETKSMHELVLKRWSSSKSYVLIGKWNQDFVRRRELRKGDEIGFQWDPFNRAFNFCVLKRAMMPS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2162 179 SUPERFAMILY DNA-binding pseudobarrel domain 60 169 IPR015300 -
Mal4g2162 179 MobiDBLite consensus disorder prediction 1 52 - -
Mal4g2162 179 Gene3D - 61 176 IPR015300 -
Mal4g2162 179 MobiDBLite consensus disorder prediction 19 33 - -
Mal4g2162 179 CDD B3_DNA 62 173 IPR003340 GO:0003677
Mal4g2162 179 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 12 174 - -
Mal4g2162 179 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 12 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2162 Mal-Chr4 50658739 50659278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2162 64 158 RAV Transcription Factor Family AT1G50680 33.333 3.41e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2162 - - gmx:102667341 250.366