Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2120 ATGGATAATTCGGATCAGACTCAACAGCAGCAACAATCTGCGATCGGAGTTGCACCAGGTACTAGCCAAATGGTCTATTCTTCTCACTACCAGACTGTTCCCATGGTGGCTTCTGGCACACCTGCTGCAGCTGTTCCTACTCCAACACAGCCTCCAGCCACCTTCTCTAATTCCGCCCACCAATTCGCATACCAGCAAGCACAGCATTTCCACCATCAACAGCAGCAACAGCAACATCAGCAGCTTCAAATGTTCTGGGCAAACCAAATGCAAGAAATTGAGCAAACATTCGACTTTAAAAACCATACTCTCCCACTTGCTCGTATAAAGAAAATAATGAAAGCCGATGAGGATGTTCGCATGATCTCAGCAGAAGCTCCAGTCGTATTTGCAAAAGCATGTGAAATGTTCATATTAGAGTTGACTTTGCGATCTTGGATCCACACAGAAGAGAACAAGAGGAGAACACTACAAAAGAATGATGTTGCAGCTGCTATTGCAAGAAATGATGTTTTTGATTTCTTGGTTGATATCATTCCTAGAGATGAATTGAAAGAAGAGGGGCTTGGAATCGCAAAGGCTACTATTCCAATAATCGGTGCTCCAGCTGATATGCCATATTATTATGTCCCACCACAACATCCTTTAGGTCCTACAGGGATGATCATGGGAAACCCAGTTGATCAAGCAGCACTATACTCTAGCCAGCAGCCTCGACCTCCTGTGGCTTTCATTCCATGGTCAAATGCACACATCCAGCAACACCAGCCACCGCAACAACATCAAACAGACTCTTAA 798 0.4474 MDNSDQTQQQQQSAIGVAPGTSQMVYSSHYQTVPMVASGTPAAAVPTPTQPPATFSNSAHQFAYQQAQHFHHQQQQQQHQQLQMFWANQMQEIEQTFDFKNHTLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDVAAAIARNDVFDFLVDIIPRDELKEEGLGIAKATIPIIGAPADMPYYYVPPQHPLGPTGMIMGNPVDQAALYSSQQPRPPVAFIPWSNAHIQQHQPPQQHQTDS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2120 265 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 103 166 IPR003958 -
Mal4g2120 265 Gene3D Histone, subunit A 64 181 IPR009072 GO:0046982
Mal4g2120 265 SUPERFAMILY Histone-fold 58 175 IPR009072 GO:0046982
Mal4g2120 265 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 5 258 - -
Mal4g2120 265 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 5 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2120 Mal-Chr4 47909368 47910165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2120 82 210 CCAAT-HAP5 Transcription Factor Family AT1G56170 86.154 3.93e-80 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mal4g2120 CBFD_NFYB_HMF 5.9e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2120 K08066 - pvy:116124445 379.793