Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2118 ATGTCCAATGAGGGAGGAAATGATTGGTCCTTGGAGCTTCCTAGAGATGATAATTTAGTATATGAAGAGGATGATGAAATAATAGATAGTCCAACCTTTCAAGAGCCACAACATGAACTTTTGCCTCAAGCCAATCACATTGATGATTCAGTTCCTTATGAAGGGAAGGTATTTAATAGTGATGATGAAGCTTACAACTTTTATTGTTTGTTTGCACGAAAAAATGGTTTTTCAATTAGACGTCATCATGTTTACAAATCTATTAAGCATCAGTCCGAGGATAACCCATTAGGTATTTATAAAAGAGAGTTTGTTTGTCATCGTGGTGGTACTATTAACCAGCACAAAGATAATGAAGTGGATGGTCAAAGAAAACGGAAGTCATCAAGATGTAATTGTGGTGCAAAATTGTTGGTTCATAGAACAACAATTAACTTTGAGAAAAAATGGGCGGTGAAATACTTCAATAATAATCATAACCATGAGTTATTAGATGATAAAGAGGTTAAATTTCTTCCTGCTTATAGAAACATTCCAATTATTGATCAAGATCGCATTCTTTTGTTGTCAAAAGCTGGTTCCTCTGTAAGTTTAATAATAAGAGTGCTTGAGTTAGAGAAAGGAGTAGATGCAGGAAATCTACCATTTTTGGAGAAAGATATTAGAAATTTTATTCAATCTCAAAGTGGTGTTGGTAAAGAGTGTGATGCTTCAAATGTTCTCAAATTATGTAAAAGCCTGAAAGATGCAGATGATGCATTTGAGTATGAATTTTCAATAGATGAAAATAACAAATTGGAGCATATTATCTGGGCATTTGGTGATTCAATTCGAGCATATGAAGCTTTTGGAGATGTGGTTGTTTTTTATACCACCTATAGAATAAATCGTTATGACATGCCACTTGGAATATGGGTTGGGGTCGATAATCATGGAAATTCCATTTTCTTTGGTTGTGTTCTATTGCAAAATGTCAAAATGTTTAGCACATTATATCGCTGCAATGACTAG 1011 0.3383 MSNEGGNDWSLELPRDDNLVYEEDDEIIDSPTFQEPQHELLPQANHIDDSVPYEGKVFNSDDEAYNFYCLFARKNGFSIRRHHVYKSIKHQSEDNPLGIYKREFVCHRGGTINQHKDNEVDGQRKRKSSRCNCGAKLLVHRTTINFEKKWAVKYFNNNHNHELLDDKEVKFLPAYRNIPIIDQDRILLLSKAGSSVSLIIRVLELEKGVDAGNLPFLEKDIRNFIQSQSGVGKECDASNVLKLCKSLKDADDAFEYEFSIDENNKLEHIIWAFGDSIRAYEAFGDVVVFYTTYRINRYDMPLGIWVGVDNHGNSIFFGCVLLQNVKMFSTLYRCND* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2118 336 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 329 IPR031052 GO:0006355
Mal4g2118 336 Pfam FAR1 DNA-binding domain 66 164 IPR004330 -
Mal4g2118 336 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 50 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2118 Mal-Chr4 47858743 47859753 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g2118 FAR1 2.8e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2118 - - ccaj:109802755 486.108