Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2116 ATGGATCCTAGAAATGAATACCAGCCTGGATCACAGTCAATAATGCATGACCATATGGATGGAATTTATACGAGTAGAAGACCACATGACCTCAATACATTGGAAGTTAAACCTGTGCAGCATTATTCGATACAGACGGGTGAGGAGTTCTCTCTTGAGTTTATGAGAGATAGGGCGAATAACGGGAAGCCTGTATTTTCGAATGTCGGTGATCCCAATTATACAACTGGTTATATGGAACTGAAAGGCATTTTAGGAATCAGTCATGGAGGATCTGAAACTGGATCAGACATGTCCATGCTATCAATGATGGAGAAATATCCTAAAGAGTTTGATAGAAGCAACTACGGATCGATTCGATCAATACCTAGATCTTCGCTGCATCAGGACAACAGACAGTTTGTGCATGGATATGGCTCTTCCGAAAGTTATGATAACTCATCAATGATGATGAAGTTTCTTTGCAGCTTCGGTGGTAGAATATTGCCACGACCATGTGATGGAAAGCTAAGGTATGTCGGAGGCCAAACACGTATTCTCCGTATAAGAAAGGACATATCTTATCACGAGCTCATTCAGAAAGCATTGATGATCTATAACCAAGTCCATACAATTAAGTATCAGCTTCCCGGGGAAGATCTCGATGCTTTGGTATCTGTATCATCTGATGAGGATTTACAGAATATGATGGAAGAATGTAATCATCTAGAAGATAGAGAAGGATCACAAAAGCTTCGGATGTTTTTGTTCTCAATCAGTGATTTGCAGGATGCTCAGTTTGGTCTCACTGCCATGAGCGATGATTCTGAAGTCCAGTATGTTATTGCTGTTAATGGCATGGACTTGGAATCGAGAAAAAACTCAACTATGGTCGGTTTCGGCTTTTCTGCAAACGATATAAATGAATTGGACGGGGAAAATATTGACGGACAGGGCAATGCTCCTCAGACGAACAATTTCGACTCATCATTGGCTACTCATTTTTCACAACCAGTGCTACCAACTTCCTTGAATCCATACGGAATGTATCCAGTGTTTTATGGTGATCAAATGATACGCCACGGTGAACCTAACAGTCATGGTCAATATCTTATGAATCATGGTGTTGATCCTTCTTATAAACCTTTTATTGAAGAGGCTCCTATTAATATGCTTCCTCATATGCCTAATATTCAACAAGGGGTTTTAAATGAAGGCTATCCGCCTAGTGGAGTACAAGTGCAAAATTCAGAAATACCCGAAACTTTGGTGAGAATGATGGCTGATAGTTCAATTCAACAAGAAACACTATCACCGTCTCCTTCTCAACTGTTTGACGGTTACATAAAAAATGATTATCCAGAAGCATCCGTTGTAGTTAGTGCTCCAGAGGGGAATTCATTGCCTCCGACAAAATCGAACCAGCCCTCGGATTATGACGAGGCTTCTTCTACTTCCAGCAGTGCATTTGTTGCGAATCCTTATGTTGATTCTCGCAACAATGCAGTTGACTTGAGTTATCTTCACCCTCCTCCTCTTCCTAAAAGAGTTTATTATTCAGAAAGAATTCCAAGGGAGCAAGTAGAGTCGCTGAATCGGTCCTCAAAGTCAGATGATGCGCACAATTCTCAGTTTCACGCTTCAGATTTACTTTCTGGTGTCAATTCACAGGGTTCAGCTATAGACTCCGGTAACAACTTGCATGATGGAAATCCGTCTAATCTAGCCAAGGAACTGAACATCACAGCGAAGCCCTTGCCTGCAGATGGCGAAGGAACCAAAGATATCTTAAATAAGGAGAATGCTGTTATGTTGGAAATGGAAAATTATCATAACGATAACCATAAAGAATCCCCGCTTGAAGGTAGATCAGACATCCCTGTGAAAGAGTCAAATAGTGATTTTAACATGCAAGCACTACCTGTTCCTTTGAATGCAAACGCAACTGCGAAAGTTGATTCACAAGGACAAGGTGATATTCTTATTGACATTAATGATCGATTCCCACGTGAATTGCTTAATGATATGTTCTCTAAAGCAATACTAGAAGAAGAAGATTCCTCTAGTCAACATCCATTAGCTTCAGGTGGAATAGGTTTAAGTATCAACATGGAAAATCATGAACCTAAAAGTTGGTCGTATTTTCAAAAATTGGCGCAAGAAGGGAACGATAATGCATCTCTTATTGACCAGGATCATCTTGGTTTTTCACCTGGTGTAGTTGGAGATAATAGAGCTCAACATGTTGCACCTTTAACAACTGATGAAGTTCCTCTAAACCGTGCAGAATTCCATCTCAATTTTGGTGAAGAAATTCAGAAAGACTTGCATGGAGAAAATGGAACAGAAACTACTGTTCTGCAATCAAATTACGATCAGTCTCAAATTAATGACACTGAAAGTATGCAATTTGATGCTATGATAGAAAACCTAAGAGGACAAGAGTCCGAATATGAGGTTGGAAAGTTTGAAAAGGAAAATAGCAGTCTACCTCCTCTTGATCCTTCTTTAGGAGAATTTGATATGAGTACTTTGCAGGTCATAATGAATGAAGATCTTGAAGAGCTGAAGGAACTAGGTTCCGGTACCTTTGGAACTGTATATCATGGAAAATGGCGAGGAACAGATGTTGCCATTAAGAGAATAAAGAAGACTTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTTGAGTTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTAGTTCAAAATGGACCAGGAGGAACAATGGCAACTATTACAGAGTATATGGTTGATGGTTCTCTTAGGCATGTGTTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGACTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCCAAAAATATTGTGCATTTCGACTTAAAATGTGACAATTTACTTGTAAACTTAAAAGATCCATTACGGCCAATATGCAAGGTTGGTGATTTTGGTTTGTCAAAAATTAAACGAAATACATTGGTTTCTGGTGGGGTGCGGGGCACTCTACCTTGGATGGCACCAGAGCTGCTGAATGGTAGCAGCAGCAAGGTCTCCGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTACTATGGGAGATTCTTACCTGTGAGGAGCCATATGCCAACATGCACTACGGTGCAATCATAGGTGGAATTGTTAACAACACACTAAGACCAACAATCCCAAATTATTGTGATAGTGAATGGAGAACACTGATGGAGCAATGTTGGGCACCAAATCCTGCTGTTAGGCCATCCTTCACAGAAATAGCGAGTCGATTGCGCACTATGACAACCGCGGCCGGCCAAAGCAAATCACCGGGCCACAAGGCATCCAAATGA 3387 0.408 MDPRNEYQPGSQSIMHDHMDGIYTSRRPHDLNTLEVKPVQHYSIQTGEEFSLEFMRDRANNGKPVFSNVGDPNYTTGYMELKGILGISHGGSETGSDMSMLSMMEKYPKEFDRSNYGSIRSIPRSSLHQDNRQFVHGYGSSESYDNSSMMMKFLCSFGGRILPRPCDGKLRYVGGQTRILRIRKDISYHELIQKALMIYNQVHTIKYQLPGEDLDALVSVSSDEDLQNMMEECNHLEDREGSQKLRMFLFSISDLQDAQFGLTAMSDDSEVQYVIAVNGMDLESRKNSTMVGFGFSANDINELDGENIDGQGNAPQTNNFDSSLATHFSQPVLPTSLNPYGMYPVFYGDQMIRHGEPNSHGQYLMNHGVDPSYKPFIEEAPINMLPHMPNIQQGVLNEGYPPSGVQVQNSEIPETLVRMMADSSIQQETLSPSPSQLFDGYIKNDYPEASVVVSAPEGNSLPPTKSNQPSDYDEASSTSSSAFVANPYVDSRNNAVDLSYLHPPPLPKRVYYSERIPREQVESLNRSSKSDDAHNSQFHASDLLSGVNSQGSAIDSGNNLHDGNPSNLAKELNITAKPLPADGEGTKDILNKENAVMLEMENYHNDNHKESPLEGRSDIPVKESNSDFNMQALPVPLNANATAKVDSQGQGDILIDINDRFPRELLNDMFSKAILEEEDSSSQHPLASGGIGLSINMENHEPKSWSYFQKLAQEGNDNASLIDQDHLGFSPGVVGDNRAQHVAPLTTDEVPLNRAEFHLNFGEEIQKDLHGENGTETTVLQSNYDQSQINDTESMQFDAMIENLRGQESEYEVGKFEKENSSLPPLDPSLGEFDMSTLQVIMNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKTCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQNGPGGTMATITEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTCEEPYANMHYGAIIGGIVNNTLRPTIPNYCDSEWRTLMEQCWAPNPAVRPSFTEIASRLRTMTTAAGQSKSPGHKASK* 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2116 1128 CDD STKc_MAP3K-like 852 1109 - -
Mal4g2116 1128 Gene3D Phosphorylase Kinase; domain 1 839 933 - -
Mal4g2116 1128 Pfam PB1 domain 167 250 IPR000270 GO:0005515
Mal4g2116 1128 Gene3D - 169 252 - -
Mal4g2116 1128 PRINTS Tyrosine kinase catalytic domain signature 928 941 IPR001245 GO:0004672|GO:0006468
Mal4g2116 1128 PRINTS Tyrosine kinase catalytic domain signature 965 983 IPR001245 GO:0004672|GO:0006468
Mal4g2116 1128 PRINTS Tyrosine kinase catalytic domain signature 1036 1058 IPR001245 GO:0004672|GO:0006468
Mal4g2116 1128 PRINTS Tyrosine kinase catalytic domain signature 1080 1102 IPR001245 GO:0004672|GO:0006468
Mal4g2116 1128 MobiDBLite consensus disorder prediction 457 479 - -
Mal4g2116 1128 CDD PB1_UP2 154 250 - -
Mal4g2116 1128 PANTHER SERINE-THREONINE PROTEIN KINASE 643 1128 - -
Mal4g2116 1128 SUPERFAMILY CAD & PB1 domains 167 256 - -
Mal4g2116 1128 MobiDBLite consensus disorder prediction 454 479 - -
Mal4g2116 1128 ProSitePatterns Protein kinases ATP-binding region signature. 852 877 IPR017441 GO:0005524
Mal4g2116 1128 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 104 592 - -
Mal4g2116 1128 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 643 1128 - -
Mal4g2116 1128 Gene3D Transferase(Phosphotransferase) domain 1 934 1127 - -
Mal4g2116 1128 SUPERFAMILY Protein kinase-like (PK-like) 835 1108 IPR011009 -
Mal4g2116 1128 Pfam Protein tyrosine and serine/threonine kinase 847 1109 IPR001245 GO:0004672|GO:0006468
Mal4g2116 1128 PANTHER SERINE-THREONINE PROTEIN KINASE 104 592 - -
Mal4g2116 1128 SMART serkin_6 846 1113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2116 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 971 983 IPR008271 GO:0004672|GO:0006468
Mal4g2116 1128 SMART PB1_new 165 252 IPR000270 GO:0005515
Mal4g2116 1128 ProSiteProfiles Protein kinase domain profile. 846 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2116 1128 MobiDBLite consensus disorder prediction 547 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2116 Mal-Chr4 47834774 47842506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2116 32 1128 MAP Kinase Kinase Kinase AT1G16270 49.664 0.0 970
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Mal4g2116 PK_Tyr_Ser-Thr 3.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2116 - - gmx:100799639 1634