Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2088 ATGCCTGATTTTCCAGAGATGAATCACAAAATATCAGAAGAACATTTTGAGACACATCATAATGCTCATAGTAGTTATCCAAATTCAGGAAACACTTCACCAACTCATCACAAAAAGTTAAATCAAGAAGAAAAAGAAGCATACACAAATGAGTATTCAGCAAGTGAAGCTGCTAGACATGTGGACCAAGTTTCTAAAACTGAATCAAAATTTGCAAATAAAAATAGACCACAAAAACTAAGTCCACCAAACAAAAACGTTCCTGATGCATTTTTAAGACAAAGTCCAAGGAACAGGATGCCTTCAAATTCTGATGCTGCAACTCCATTACCAACAGGAGTTTCAAAGGGCATGTCTACTAATACAAAGACGAACAATCAAAACGCGCCAGGAAGTGGAGCTAGCTCGCGAAGCGACAGTTTAGAGAGCACAAGTTGTTCTTCAAACATTAGGCCACATACTGGTGGTGATGTGAGGTGGGATGCAATTAACATGGTTTCCAAAAGTGGTCCTTTAAATCTTACACATTTTAGGCTTCTTAAACGTATCGGTTACGGTGACATTGGAAGTGTTTATCTTGTTGAACTTAAAGGAACTGATGCTCATTTTGCTATGAAAGTAATGGACAAGGCTGCTCTTATAAGTAGAAACAAACTTCTTAGGTCACAAACTGAAAGGGAGATTCTTGGACTTCTTGATCACCCTTTCTTGCCTACTTTGTATTCTTACTTTGAAACTGATAAGTTTTACTGTCTGGTTATGGAGTACTGTAGTGGCGGTGATCTTCATTCGCTTCGACAGAAACAACCAAATAAGTGTTTCACTGAAGAAGCTGCAAGGTTCTATGCTTCAGAGGTTTTGTTAGCTCTTGAGTACCTACACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTTTAGTTAGGGATGAAGGTCACATCATGCTCTCGGATTTTGATTTATCGCTTCGCTGCTCTGTCTGTCCAACACTTGTCAAGTCTTCCTCCACCCACGCAGGAAACAGCAGCAGTAATAATGATTCCGGAGGCATATTGAATGATGACCAAGCAGTGATTGCTCAGTCATCAACAAGCTTCTTCCCTCGCATTTTACCTTCCAAGAAAAATCGGAAGGCAAAATCAGACTTCGGCCTATTGGTTAACGGTAACCGCCTCCCCGAACTAATGGCAGAACCAACCAATGTAAGATCAATGTCATTCGTAGGTACGCACGAGTATCTTGCACCTGAAATCATCAAAGGAGAAGGACACGGTAGCGCGGTTGATTGGTGGACATTCGGAATCTTCTTGTACGAACTATTGCACGGCGCAACGCCGTTTAAAGGCGCCGGATACAAAGCAACACTTTTCAATGTTGTTGGACAGCCATTAAGGTTTCCAGATAGTCCTCAAATAAGTCCTGTGGCTAAAGATCTTATTAGAGGATTGTTGATAAAAGAACCTCAGAAGAGAATTGCATATAAAAGAGGAGCAACAGAAATAAAACAGCATCCATTTTTTGAAGGAGTGAATTGGGCTCTAGTTAGAAGTGCAACACCACCACATATACCAGATATCATAGACTTTTCAAAGTATGCTAGAAAAGAAACAGCACCACCACCAGTTGATAAAAAGTTGCCAGATATTGCTAATGATAAAAAAGTCAAAACATCAACTAATGATTCTTATGTAGATTTTGAGTATTTTTAG 1716 0.3969 MPDFPEMNHKISEEHFETHHNAHSSYPNSGNTSPTHHKKLNQEEKEAYTNEYSASEAARHVDQVSKTESKFANKNRPQKLSPPNKNVPDAFLRQSPRNRMPSNSDAATPLPTGVSKGMSTNTKTNNQNAPGSGASSRSDSLESTSCSSNIRPHTGGDVRWDAINMVSKSGPLNLTHFRLLKRIGYGDIGSVYLVELKGTDAHFAMKVMDKAALISRNKLLRSQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEYCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVCPTLVKSSSTHAGNSSSNNDSGGILNDDQAVIAQSSTSFFPRILPSKKNRKAKSDFGLLVNGNRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGATPFKGAGYKATLFNVVGQPLRFPDSPQISPVAKDLIRGLLIKEPQKRIAYKRGATEIKQHPFFEGVNWALVRSATPPHIPDIIDFSKYARKETAPPPVDKKLPDIANDKKVKTSTNDSYVDFEYF* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2088 571 ProSiteProfiles Protein kinase domain profile. 177 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2088 571 SUPERFAMILY Protein kinase-like (PK-like) 165 528 IPR011009 -
Mal4g2088 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Mal4g2088 571 Pfam Protein kinase domain 178 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2088 571 Pfam Protein kinase domain 383 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2088 571 Gene3D Phosphorylase Kinase; domain 1 169 262 - -
Mal4g2088 571 MobiDBLite consensus disorder prediction 6 21 - -
Mal4g2088 571 PANTHER FLIPPASE KINASE 1-RELATED 32 571 - -
Mal4g2088 571 Gene3D Transferase(Phosphotransferase) domain 1 263 526 - -
Mal4g2088 571 MobiDBLite consensus disorder prediction 96 151 - -
Mal4g2088 571 MobiDBLite consensus disorder prediction 1 151 - -
Mal4g2088 571 CDD STKc_phototropin_like 175 530 - -
Mal4g2088 571 SMART serkin_6 177 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2088 571 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 32 571 - -
Mal4g2088 571 MobiDBLite consensus disorder prediction 22 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2088 Mal-Chr4 47044573 47047043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2088 141 571 AGC Kinase Gene Family AT1G79250 71.938 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal4g2088 Pkinase 1.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2088 - - gmx:100819001 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2088 4 47044573 47047043 Mal4g2088 4 47044573 47047043 ECH