Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2082 ATGGCGAATTGTGAGTGGTCTCAGATTGTGTTCATAGGCATCATAACATTGACAACCCTTTTCCTATGCAACATCAATTTTGCATTTGCAACAGACCCATTTGTCCAACAAAAGCATGACAGGATTGGTAGGGCACTCCCAGGTCAAAACTTCAACATCAGTTTTGAACACTACTCTGGTTATATCACTGTCAACGAGGATGTTGGTAGGAACTTGTTTTACTGGTTCATTCAAGCTGATCATGTAGATCCTACTTCACTACCACTTCTTTTATGGCTTAATGGTGGTCCTGGTTGTTCTTCTATTGCTTTTGGTGAAGCAGAGGAAATTGGCCCTTTTCATATTAATTCTGATGGCAAAAACCTTCATCTTAATCCTTATTCTTGGAATCAAGTTGCCAATATTCTTTATATTGACTCTCCTGGTGGAGTTGGTTTTTCATATTCACGGAATTCATCTGACATTCTCAACAATGGCGATAAGAGGACAGCTGAGGACAATCTCATATTTCTATTGAAGTGGTTTGAGCGTTTTCCCCAGTATAAAAAAACAGACTTTTTCCTCAGTGGTGAAAGCTATGCAGGACATTATGTTCCCCAACTTAGCCAAGTTATTGTCAAGTACAACTCAGCTACAAAACAAGATCCTATAAATTTCAAAGGTTACATGGTAGGAAATGCTCTAACAGATGACTTCCATGATCAGTTGGGGATTTTCGAGTTTGTGTGGACCAATGGTATGATTTCGGATCAAACATTCAAGCTCTTGAACTTGCTTTGTGATTTTCAGTCAGTTGAACACCCGTCACAGTCATGTGACAATATCTTGGAAATCGCTGATAAAGAGATGGGTAATATAGACCCATACAGTATCTTTACCCCTCCTTGCCATGCGAATGATAATCAGCTTGTCAGAAGAAAGCATAGTGTTGGAAGACTCAGAAGTGTGTATGATCCTTGCACCGAGAAGCACAGCACTATATACTTCAATCGACCAGAGGTCCAAAAGATTCTACATGTTGATCCAGACTATAAGCCTGCTAAATGGGAGACCTGCAGTAATGTGGTAAATACAAACTGGAAGGATTCTCCTAGAACAGTGCTTGATATATATCGTGAACTTATTCCTACCGGGCTGCGAATATGGATTTTCAGTGGTAATACAGACGCTGTAATCCCGGTAACATCTACTCGCCATACCATAAATGCTCTCAAACTTCCAACTGTGAGCCCCTGGCGTGCATGGTATGATGACGGGGAGGTAGGAGGATGGACCCAAGAATATGCCGGACTCACATTTGTAAATGTAAGGGGTGCAGGGCACGAAGTTCCTCTGCATAGACCAAAACTTGCTCTAACATTGATCAAAGCCTTCTTAGCAGGGACCTGCATGCCAACTCTTGAACCACTGACACTCACCGCCGCCTCTTGA 1431 0.4179 MANCEWSQIVFIGIITLTTLFLCNINFAFATDPFVQQKHDRIGRALPGQNFNISFEHYSGYITVNEDVGRNLFYWFIQADHVDPTSLPLLLWLNGGPGCSSIAFGEAEEIGPFHINSDGKNLHLNPYSWNQVANILYIDSPGGVGFSYSRNSSDILNNGDKRTAEDNLIFLLKWFERFPQYKKTDFFLSGESYAGHYVPQLSQVIVKYNSATKQDPINFKGYMVGNALTDDFHDQLGIFEFVWTNGMISDQTFKLLNLLCDFQSVEHPSQSCDNILEIADKEMGNIDPYSIFTPPCHANDNQLVRRKHSVGRLRSVYDPCTEKHSTIYFNRPEVQKILHVDPDYKPAKWETCSNVVNTNWKDSPRTVLDIYRELIPTGLRIWIFSGNTDAVIPVTSTRHTINALKLPTVSPWRAWYDDGEVGGWTQEYAGLTFVNVRGAGHEVPLHRPKLALTLIKAFLAGTCMPTLEPLTLTAAS* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2082 476 ProSitePatterns Serine carboxypeptidases, histidine active site. 431 448 IPR033124 GO:0004185
Mal4g2082 476 SUPERFAMILY alpha/beta-Hydrolases 44 464 IPR029058 -
Mal4g2082 476 Pfam Serine carboxypeptidase 47 460 IPR001563 GO:0004185|GO:0006508
Mal4g2082 476 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 468 IPR001563 GO:0004185|GO:0006508
Mal4g2082 476 Gene3D - 367 461 - -
Mal4g2082 476 Gene3D alpha/beta hydrolase 37 298 IPR029058 -
Mal4g2082 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Mal4g2082 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Mal4g2082 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Mal4g2082 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
Mal4g2082 476 ProSitePatterns Serine carboxypeptidases, serine active site. 188 195 IPR018202 GO:0004185
Mal4g2082 476 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 16 468 - -
Mal4g2082 476 Gene3D - 320 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2082 Mal-Chr4 46610985 46618512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2082 347 461 Calmodulin-binding Proteins AT2G22960 25.000 3.02e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2082 K16297 - gmx:100805227 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2082 4 46610985 46618512 Mal4g2082 4 46610985 46618512 ECH