Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2068 ATGGTTCGGTTAATTTCAATTCGGTTCGGTTCGGTTCGGCGGTTCGGTTCAGTTTTTGGTTATTTTTGCCCACCCCTACTGTACGTTGAGCTGTACTTAAGCGCTGATGGTTGTTTTTTCTTTAGGCCAAAGAATATATACAAGGATCCAGATGATGGGCGGCAACGGTTTTTGCTTGAACTGGAATTTGTTCAATGCCTTGCTAATCCTACCTACATCCACTATTTGGCTCAGAACCGATATTTTGAGGATGAAGCATTCATTGGGTACTTAAAGTATCTACAATATTGGCAACGCCCAGAATATATTAAATTTATTATGTATCCTCACTGCCTCTATTTTCTGGAGCTTCTTCAGAATGCAAATTTTCGCAATGCAATGGAATTGACACATAGACAACAGTTTTTCTTCTGGAAGAACTATAGGAATAATCGGCTTAAACACATTTTACCAAGATCACTTCCAGAACCTATTGCCGTACTTCCTGCTCCTACTTCAACTCAACCTCAGCCGCATGTTCCTGCACTACCACCAGTACCTGCTACAAGTGTTGCTGTGACAACATGTTCTACTCAAGTTCCTTCTCCGATGCCATATGCAGGGCCGGCCCTGTGCAGGTGCAAGGAGGCCCACTGCACAGGGCATCAAAAAAAGGGGGGCAGCAAAATTTTTTTTATATACTTTTACTATCAGTTATACACCCGCTGTGAACATATTGGAAAAAAGAAGAAGGGAATGATATTTTGGAGACAATACAATATGAAGACTTGA 771 0.415 MVRLISIRFGSVRRFGSVFGYFCPPLLYVELYLSADGCFFFRPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMELTHRQQFFFWKNYRNNRLKHILPRSLPEPIAVLPAPTSTQPQPHVPALPPVPATSVAVTTCSTQVPSPMPYAGPALCRCKEAHCTGHQKKGGSKIFFIYFYYQLYTRCEHIGKKKKGMIFWRQYNMKT* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2068 256 Pfam SOH1 55 135 IPR008831 GO:0003712|GO:0006355|GO:0016592
Mal4g2068 256 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 43 183 - -
Mal4g2068 256 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 43 183 IPR008831 GO:0003712|GO:0006355|GO:0016592
Mal4g2068 256 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 42 138 IPR038089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2068 Mal-Chr4 45941010 45942897 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Mal4g2068 Med31 9.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2068 K15153 - gmx:100818057 286.96