Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2062 ATGCATGAAATGGCTAAGAGGGCAGTGTTGATAGGGTGCAACTATCCAGGCACAAAGGCTGAGCTAAAAGGGTGCATTAACGATGTGTGGAGGATGCACAAATGCCTCATTCACAAATATGGATTCTCAGATAAAGATATTACGGTTCTCATTGACACAGACCATTCTTACACCCAACCTACAGGCAAGAACATTAGATCTGCCATGTGTAGGTTGGTTCGATCGGCTCAACCTGGTGATGTGTTCTTCGTCCATTACAGCGGTCATGGTACTCGTCTCCCTGCTGAGACCGGGGAGGACGATGATACTGGCTATGATGAGTGCATTGTTCCCACAGATATGAATCTCATCACTGTACCTAAAGATTGTAGGATCACAATCGTATCAGATTCTTGTCACAGTGGTGGATTGATTGAAGCAGCAAAGGAGCAAATAGGAGAGAGCACAAAGGAAGGAGGACAACATTCATCCCCAGGCTTCAAAAACTTTCTTCACAGAACTGTGGATGATACCATCAAGTCTCGTGATATTGAAGAAAAACAAGTGGAACTTCATCATGGAGACCACAGCTATGTGAAGAATAGGTCTTTGCCTCTTTCAACTCTTATTGACATACTTAAGCAGAAAACTGGGAAGGATGATATAGAAATTGGAAAACTAAGACCTACACTATTTGATATCTTCGGGGAAGATGCTAGTCCTAAAGTGAAGAACTTCATTAAGTTTGTCTTGAACAAACTTCAAGGCCATAGTGGAATTTTGGGGCTGGTGAACAATCTTGCGCAAGGGCTTCTCGTACATAAGCTGAATGACAATGATGAGGAATATGAAGATCCAGTCAAGAGTGCACCAGAAACATATGGTACATCAGCTAAGCGCAACATTGTAGATAGTGGAATTCTACTGAGTGGTTGTCAAACTGACCAAACTTCGGCAGATGCAAGTCCTAATGGAAATTCTGAAGAAGCTTATGGAGCTTTTAGCAATGCCATACAAGCTATAATTGCAGGGAAAGATGGTGTAGTTACAAACCGAGAGATTATTTTGAAGGCAAGGAAGAAACTTCATAGGCAAGGTTACAGTCAGAAGCCAGGGCTCTATTGTAGTGACAACAATGTCGATGCTCCTTTTATATGCTGA 1140 0.4228 MHEMAKRAVLIGCNYPGTKAELKGCINDVWRMHKCLIHKYGFSDKDITVLIDTDHSYTQPTGKNIRSAMCRLVRSAQPGDVFFVHYSGHGTRLPAETGEDDDTGYDECIVPTDMNLITVPKDCRITIVSDSCHSGGLIEAAKEQIGESTKEGGQHSSPGFKNFLHRTVDDTIKSRDIEEKQVELHHGDHSYVKNRSLPLSTLIDILKQKTGKDDIEIGKLRPTLFDIFGEDASPKVKNFIKFVLNKLQGHSGILGLVNNLAQGLLVHKLNDNDEEYEDPVKSAPETYGTSAKRNIVDSGILLSGCQTDQTSADASPNGNSEEAYGAFSNAIQAIIAGKDGVVTNREIILKARKKLHRQGYSQKPGLYCSDNNVDAPFIC* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2062 379 PANTHER METACASPASE-5 4 379 - -
Mal4g2062 379 PANTHER METACASPASE-4 4 379 - -
Mal4g2062 379 Gene3D - 1 209 - -
Mal4g2062 379 Gene3D - 263 378 - -
Mal4g2062 379 SUPERFAMILY Caspase-like 7 115 IPR029030 -
Mal4g2062 379 Pfam Caspase domain 6 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2062 Mal-Chr4 45846185 45848413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2062 - - cam:101509553 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2062 4 45846185 45848413 Mal4g2062 4 45846185 45848413 ECH
Mal4g2062 4 45846185 45848413 Mal5g2106 5 49682723 49684706 PCT