Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2061 ATGCGCTGGTTGCCGCATCTACTTCTCCGCCAAGCAAGGCGTGGCCGAGTTACCGTTCCGAATTGTCAAAAGCCGCATGTGTTTGCAGGTGTTGCTTCGTCTGCTGTGCAAATTCGGTGTTTCTCGTGTAAGGCGCTTGTGAATGGACCGAGTAATTTGGTCAATTTTCCTTGTCCACAATGTCACGTGAGGATTGATGTTCATGAAAATGCTTATGCTCAAGAAGTTAACGAGCTGGTTGAAGAAGTGGAGCAGGAAGAAGCTGATGGAGGTATCGCCGGAGAAACATTTACAGATTATCGTCCATCAAAGCTATCTATCGGACCGCCACACCCAGATCCGATTGTAGAGACATCTTCCTTGTCTGCAGTGCAGCCACCTGAGCCTACTTATGATCCAAAGATTAAGAATGATTTGGAACGTTCAAAGGCTTTGTCATGCTTGCAGATCGAGACATTGGTTTATGCTTGTCAGAGACACCTTCAACACGTTCCTAGTGGTGTTAGGGCAGGATTCTTTATTGGAGATGGAGCTGGTGTAGGTAAAGGTCGAACAGTTGCTGGGCTAATCTGGGAGAACTGGCACCATGGAAGGAAAAAAGCCTTGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGATGCCAGGCGAGATTTGGATGATATGGGTGCAAGTTGCATTGCAGTGCATGCTTTGAATAAACTGCCTTATACTAAGCTTGATACAAAGACTGTTGGAGTTAGGGAGGGAGTTATTTTCTCGACATACAGTAGCCTCATAGCATCATCTGACAGAGGGCGTACCCGCATGCAACAGCTTGTGCAGTGGTGTGGACCTGGGTTTGATGGTCTTATAATATTTGATGAGTGTCATAAAGCAAAAAATTTGGTTCCCGAAAAGGATAAGAAGCCAACGAAAACTGGTCAAGCAGTACTTGATATACAGGCTGAACTACCTGAAGCTCGGGTTGTTTATTGCTCAGCTACTGGTGCATCTGAACCTCGCAATATGGCTTATATGGTTCGACTTGGCCTTTGGGGAGCTGGGACTTGTTTCCCTGATTTTGGTGAATTTCTAGGTGCTCTTAACAATGGGGGTGTTGGAGCTCTAGAACTAGTTGCAATGGACTTGAAAGCAAGGGGGATGTATTTATGTCGCACTCTTAGCTACAAGGGTGCTGAATTTGAAATTATTGACGCACCATTAGATGATAGAATGATGCATCTGTATAAAAAGGCTACAGAAGTTTGGGTGGATTTGCGTGGGAAGTTGCTGTCTGCCATTGAGTTAGTATCTGAAAAAATCAATACTAGACAACTATGGCGATCATATTGGGCAAGCCACCAGAGATTCTTCAGACACATGTGTATGTCTGCTAAAGTCCCTACTGCAGTGAGACTGGTGAACCAAGCATTAATGGACGACAAGTGTGTGGTCATAGGTCTGCAGAGTACAGGGGAAGCAAGGACGGAGGAAGCTGTTTCAAAATACGGCTCTGAACTTGATGACTTTATTTCTGGACCTCGTGAGTTGCTGCTAAAATTTGTTGAAGACAATTTCCCATTGCCAAAAAAGCCTGAACTTCTCCCCGACGACGGTGTAAAGGAGCTTCAAAGGAAGAGGCACTTGGCAAGTCCTGACGCTCCAGGAAAATTTAGAGTTAGAAAAGTAGCCAAGTTGGAGCCTCCTAGTGATGCTGAAAGTGATGAAGAATCTGAAACTGCCTCTGTTCCTGAATCTTCTGATTCTGATTACGGACCAGAAGGGAATGAAAGTGCTGCCTCTGGTCTTGAATCTTCCGAGTCTGACTATGAGGAATTTCAGAAATGTGAAATTTGCAGTACTGAAGAGGAAAGGGAAAACTTGTTGCAGTGTTCCCACTGTGGAAAATACGCTCATCACTCATGCTTGGTGCCCCCAATTGGCGATTTTGTTCTCGAGGAATGGGCATGTGATTTGTGCAAGAATACAACTGTCAACTATCTCCCTCCTGGAACAGACATAATTGAACTCCAAAAGAGCTATGACACAGCCATGGAGTCTAAGCAAAAAATATTAGAGAGGATTTGTGCTTTGGATCTTCCAAACAATCCCTTGGATGATATTATTGACCAGTTAGGAGGCCATGACAAAGTTGCAGAAATTACAGGAAGGAAAGGAATGCTTGTGAGGGCCCCTAGTGGAATGGGTGTGTTTTATCAGACTCGAAATACAAAAGATGTCACCGCCGAGATGGTCAACATGAATGAAAAAAAGCTCTTTATGGAAGGTAAGAAGTTAGTGGCTATCATCTCTGAAGCAGGATCAGCTGGTGTTTCGTTGCAGGCAGACCGAAGAGTAAGAAATCAGAAAAGAAGGGTTCACTTAACTCTAGAACTTCCATGGAGTGCCGACCGAGCAATTCAGCAGTTTGGAAGAACTCATAGATCCAATCAAGTCTCAGCACCAGAATACAGGTTACTATTTTCGGACCTTGGTGGAGAACGCCGGTTTGCATCAGCTGTTGCTAAGAGATTAGAATCCCTTGGAGCTTTGACTCAGGGAGATCGTAGGGCTGGACCTTCGTTAAGTGCATATAATTATGATAGTGCATATGGGAAGAGAGCTCTGATGATTTTGTACAATGGAATACTGGAGCGGGATCCTCTTCCTGTTGTACCTCCAGGATGCTTATCTGACAGACCAGATACAATCAAAGGTTTTATTATGCAGGCAAAAGCTGCTCTTCTTTCTGTTGGAATTTTTAAGGACGACGGTCTTGGAGATGATGATATGAATTGCTACATTGATGATAAAAATGATATACACAATCTTGGGCGATTTCTCAACCGGCTTTTGGGAATATCTCCTGAGACTCAGAATAGGCTATTTGAGTTATTTGTGAATATCTTGGATCTTCTTGTTCATAAAGCTCGCATTGAAGGTAACCTTGACACAGGCATAGTTGACTTGAAAGCTAATGTCATTGAACTGCAAGGGACTCCAAAGACAGTCTATGTTGATCAAATGAGCGGGGCTTCAACTGTTCTGTTCACATTCACCTTGGATCGTGGGGTTTCATGGGAGTTGGCAAATACCATGCTGAATGAGAAGCAGAAGGTTGGATTTTGTTCAGCCGATGACGGCTTCTATAAGTCGAAGAGGGAGTGGTTGGGAAAACGTCATGTTATTTTAGCATTTGAAAGTTCTTCTCCATCTATGTATAAGATAGTTCGTCCCCCTACCGGTGAATCACCTCGGGATATGCATCTGGCAGAATTAACTAGAAAATATTCAAAAGTTTCATCTTTAAAGGAGGCCCAAAATGGTTGGGAAAACGAATATGAAGCTTCGTTTAAACAGTGCATGCATGGTCCCAAATGTAAGATTGGTAAGTTCTGTTCAGTTGGCTCAAGAATACAGAAAGTAAATGTCTTAGGTGGCGTTATTCTTCCTGTTTGGGGAAACATAGATAGAGCACTTTCTAAGCAGGCCCGGCAAATGCATAAGAGGCTACGCATTGTTCGTCTTGAAACTACATCAGATAACAAACATATAGTAGGGCTTTTTATCCCTAATGCAGCAGTTGAAACTGTGCTTCAAGGTTTAAACTGGGTTATAGAACTGGATGATTGA 3612 0.4347 MRWLPHLLLRQARRGRVTVPNCQKPHVFAGVASSAVQIRCFSCKALVNGPSNLVNFPCPQCHVRIDVHENAYAQEVNELVEEVEQEEADGGIAGETFTDYRPSKLSIGPPHPDPIVETSSLSAVQPPEPTYDPKIKNDLERSKALSCLQIETLVYACQRHLQHVPSGVRAGFFIGDGAGVGKGRTVAGLIWENWHHGRKKALWISVGSDLKFDARRDLDDMGASCIAVHALNKLPYTKLDTKTVGVREGVIFSTYSSLIASSDRGRTRMQQLVQWCGPGFDGLIIFDECHKAKNLVPEKDKKPTKTGQAVLDIQAELPEARVVYCSATGASEPRNMAYMVRLGLWGAGTCFPDFGEFLGALNNGGVGALELVAMDLKARGMYLCRTLSYKGAEFEIIDAPLDDRMMHLYKKATEVWVDLRGKLLSAIELVSEKINTRQLWRSYWASHQRFFRHMCMSAKVPTAVRLVNQALMDDKCVVIGLQSTGEARTEEAVSKYGSELDDFISGPRELLLKFVEDNFPLPKKPELLPDDGVKELQRKRHLASPDAPGKFRVRKVAKLEPPSDAESDEESETASVPESSDSDYGPEGNESAASGLESSESDYEEFQKCEICSTEEERENLLQCSHCGKYAHHSCLVPPIGDFVLEEWACDLCKNTTVNYLPPGTDIIELQKSYDTAMESKQKILERICALDLPNNPLDDIIDQLGGHDKVAEITGRKGMLVRAPSGMGVFYQTRNTKDVTAEMVNMNEKKLFMEGKKLVAIISEAGSAGVSLQADRRVRNQKRRVHLTLELPWSADRAIQQFGRTHRSNQVSAPEYRLLFSDLGGERRFASAVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKRALMILYNGILERDPLPVVPPGCLSDRPDTIKGFIMQAKAALLSVGIFKDDGLGDDDMNCYIDDKNDIHNLGRFLNRLLGISPETQNRLFELFVNILDLLVHKARIEGNLDTGIVDLKANVIELQGTPKTVYVDQMSGASTVLFTFTLDRGVSWELANTMLNEKQKVGFCSADDGFYKSKREWLGKRHVILAFESSSPSMYKIVRPPTGESPRDMHLAELTRKYSKVSSLKEAQNGWENEYEASFKQCMHGPKCKIGKFCSVGSRIQKVNVLGGVILPVWGNIDRALSKQARQMHKRLRIVRLETTSDNKHIVGLFIPNAAVETVLQGLNWVIELDD* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2061 1203 Coils Coil 69 89 - -
Mal4g2061 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 730 856 IPR027417 -
Mal4g2061 1203 Pfam PHD-finger 609 655 IPR019787 -
Mal4g2061 1203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 562 659 IPR013083 -
Mal4g2061 1203 MobiDBLite consensus disorder prediction 551 601 - -
Mal4g2061 1203 Pfam P-loop containing NTP hydrolase pore-1 110 410 IPR039187 -
Mal4g2061 1203 PANTHER OS08G0223700 PROTEIN 76 1203 - -
Mal4g2061 1203 Gene3D - 142 341 IPR027417 -
Mal4g2061 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 352 IPR027417 -
Mal4g2061 1203 SMART PHD_3 608 654 IPR001965 -
Mal4g2061 1203 PANTHER STRAWBERRY NOTCH-RELATED 76 1203 IPR026741 GO:0006355
Mal4g2061 1203 ProSiteProfiles Zinc finger PHD-type profile. 606 656 IPR019787 -
Mal4g2061 1203 SUPERFAMILY FYVE/PHD zinc finger 597 656 IPR011011 -
Mal4g2061 1203 MobiDBLite consensus disorder prediction 577 600 - -
Mal4g2061 1203 Pfam C-terminal domain on Strawberry notch homologue 696 982 IPR026937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2061 Mal-Chr4 45753141 45845745 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal4g2061 AAA_34 3.3e-131 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2061 - - mtr:MTR_2g063813 1805.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2061 4 45753141 45845745 Mal4g2061 4 45753141 45845745 ECH