Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2047 ATGTTTATGCAACGAGTTGTGGTTATGATTGAGGCCGCATTTGACCGCCTGCAAAGATGTGGAAAGAGTTGCAGATTAAGATGGACAAACTATTTGAGACCAGATCTAAAAAGAGGTTCATTCACTGCAGAAGAAGAACAGATCATAATTGATATACATAGAATTCTTGGAAACAGATGGGCCCAAATAGCAAAGCACCTCCCTGGTAGAACTGACAATGAAGTGAAGAATTTTTGGAACTCTTGCATTAAGAAGAAGCTCATTTCTCAAGGCTTAGATCCACAAACTCACAATTTACTCTCTAAGAGAAACAACTCATCATCATATCAAAATTCTAGTTCCATTTTCATTCTTAGTTCACAAATGCCACCAAATACTAATAGTCTCATTGAAACAACAAGTCAAACTTTTTCTTCACTACCTAAAACTCCACAAAATAATAATATTCTTCTAACACCTTCTACAAATTTTTCTCCTAACCAATATCAAACATCTTTCAATGTGCTTTCAAACAACCTATGTGTTCCTGAGCAGGAACAGCCTCAAATAATAACTGAGAACATATCAAACATTTGTGCTACTTCATGCAATGAGAATAGCATTTGGGTTTCAAGAGTTGATGATTGTAGAGGTTCAAGATTTGATGAAGGAACACAAGGTCAAGTGGAGCAAGAGAAGGAGAAGATGTGTGTGAAGGGAATGGATGAAAAAGAAGATGTTGATATGAATGGTTGTTTTGAGAATTCTAACTTTGATTTTGGGTTGTTGGAGAGTGTACTTAACTCTGAATTTATGTCTCATGATCTAGATTATATGGATGAACTTGCATGGAGCTTTTAG 840 0.3571 MFMQRVVVMIEAAFDRLQRCGKSCRLRWTNYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDPQTHNLLSKRNNSSSYQNSSSIFILSSQMPPNTNSLIETTSQTFSSLPKTPQNNNILLTPSTNFSPNQYQTSFNVLSNNLCVPEQEQPQIITENISNICATSCNENSIWVSRVDDCRGSRFDEGTQGQVEQEKEKMCVKGMDEKEDVDMNGCFENSNFDFGLLESVLNSEFMSHDLDYMDELAWSF* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2047 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 87 IPR017930 -
Mal4g2047 279 CDD SANT 40 80 IPR001005 -
Mal4g2047 279 SMART sant 37 85 IPR001005 -
Mal4g2047 279 Gene3D - 7 37 - -
Mal4g2047 279 Gene3D - 39 114 - -
Mal4g2047 279 PANTHER MYB DOMAIN PROTEIN 55 17 267 - -
Mal4g2047 279 PANTHER BNAC05G40480D PROTEIN 17 267 - -
Mal4g2047 279 SUPERFAMILY Homeodomain-like 18 90 IPR009057 -
Mal4g2047 279 ProSiteProfiles Myb-like domain profile. 33 83 IPR001005 -
Mal4g2047 279 Pfam Myb-like DNA-binding domain 38 81 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2047 Mal-Chr4 45217857 45219562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2047 17 279 MYB Transcription Factor Family AT3G12720 44.815 1.47e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal4g2047 Myb_DNA-binding 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2047 K09422 - gmx:100791209 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2047 4 45217857 45219562 Mal4g2047 4 45217857 45219562 ECH