Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2028 ATGTCAGAAACACTACGGTTTGGTGATGGTGTTAGAGGAGAGAAAAGAAAACTAAAGCGGAAGATGGATGATGCTATTGCTGCTGATTCAGAGGTGTTATTGTCTCTGAGTGTAGGAGGAGGTGGAAGTGGAGGATCTTCATTCAAGCCCCTCAAGAGCCATGAAGAGCATAGGGAATACCCATGTCAGTTTTGCAACAAGAAGTTTCCAAGTTCTCAAGCCTTGGGAGGACACCAAAATGCCCATAGGCGAGAAAGGGTGCTTTCAAGAATGAACAAAGAAATTCAATTGGGAACTTTTGGACTTGGAGCTCATCATTTGTGTCCATACTCAATTCATCATCAATTTCCCTTCACTACTGCAGGGTTGTCACCATTTTATCATGGAATTGGATGGCCTCAATTTGTTGCACCTACAAGCTATGACAACACATTTGGGATGATCAATAACTCTTCTTGGGCTACTCAAAATCCACATGATAATAATGTTGGATTTGGAAATATTGAACCTAATAATCACATGCAGGTTCCTTTGTTTGGTGCTTCTCATAACACTCATGTCCCAATGGGAAATAATAATGATTGTGACCTAAATAACCACCAAACTTCATCCTCATTTCCCGATTTGTCCCTCAAACTTTAG 642 0.4081 MSETLRFGDGVRGEKRKLKRKMDDAIAADSEVLLSLSVGGGGSGGSSFKPLKSHEEHREYPCQFCNKKFPSSQALGGHQNAHRRERVLSRMNKEIQLGTFGLGAHHLCPYSIHHQFPFTTAGLSPFYHGIGWPQFVAPTSYDNTFGMINNSSWATQNPHDNNVGFGNIEPNNHMQVPLFGASHNTHVPMGNNNDCDLNNHQTSSSFPDLSLKL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2028 213 MobiDBLite consensus disorder prediction 190 213 - -
Mal4g2028 213 Pfam C2H2-type zinc finger 60 85 - -
Mal4g2028 213 Gene3D Classic Zinc Finger 46 99 - -
Mal4g2028 213 PANTHER ZINC FINGER PROTEIN JAGGED 1 206 IPR045320 GO:0003700
Mal4g2028 213 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 87 IPR013087 -
Mal4g2028 213 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Mal4g2028 213 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 1 206 - -
Mal4g2028 213 SUPERFAMILY beta-beta-alpha zinc fingers 57 87 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2028 Mal-Chr4 43407973 43408614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2028 57 126 C2H2 Transcription Factor Family AT5G14010 44.000 9.48e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal4g2028 zf-C2H2_6 3.5e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2028 - - mtr:MTR_2g067740 298.516