Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2011 ATGCATCAAGTTCCATCTAATCCTCCACATGGTGGTACAATCTCTCCACAGGATGTTTCTTTGATTGAGGAAGCGGAAAATCTGGTTGATCAGCATCAAGATATGAGCTTGGATATTAACGACATGGCATATGAGGATGATTCATTGGCTGATGAAGTGGAAAATTTGGTTAACCAACATCTACTTGATATTGAGTTTCTTTCTATGTTTATGGAATTGGAAAATGTGGTTGACGAACATGAAGATATGAGTTTGGACATGAACGAAATGACATATGAGGAACTTGTTGCATGGTTTGAAATTATTGGTAGTGAAAACACTGGTTTATCCGAAGAAACAATTGTGAGTCGGTTGAAGACAAAAGTTTATTCACCAAGTCCAAATGCTATTAATTTGGAGGAGTTGCCTTCTAACAATCAAGAAATTTATTCTTGCATGATTTGTCAGGTGACCTTTTAA 459 0.3638 MHQVPSNPPHGGTISPQDVSLIEEAENLVDQHQDMSLDINDMAYEDDSLADEVENLVNQHLLDIEFLSMFMELENVVDEHEDMSLDMNEMTYEELVAWFEIIGSENTGLSEETIVSRLKTKVYSPSPNAINLEELPSNNQEIYSCMICQVTF* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2011 152 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 6 46 IPR045191 GO:0061630
Mal4g2011 152 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 65 152 IPR045191 GO:0061630
Mal4g2011 152 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 6 46 - -
Mal4g2011 152 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 65 152 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2011 69 149 C3H Transcription Factor Family AT2G15530 40.244 6.71e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2011 - K19041 mtr:MTR_2g076240 107.842