Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1995 ATGTCAGTAACACTACGATTTGATGGTGATGTTGCAGGAGAGAACAGAAAGCTAAAGCGAAAAATGGAAGATGCTATTGCTCCTGATTCAGAGGTGTCCCTTTCTTTGAGTTTAGGTGGAGGTGGAAGAGGAGGATCTTCGTTCAAATCCCTTAAGAGCCATGTGGAGCTGAGGGAATACCCATGTAATTTTTGCAACAAGAAGTTTTCAAGTTCACAAGCCTTGGGGGGACACCAAAATGCCCATAGGCGTGAAAGGTTTCTTTCAAGAATGGAGAAAGAAATTCAATTGGGAACTTTTGGACTTGGTGCTCATCATTTTTGTCCATACCCAAATCATCATCAATATCCCTTTACAACTGGGTTGTCACCTTTTTATCATGGAATTGGATGGCCTCAATATGTTGCCCCTACAAGCTATGGAAACCCATTTGGGATAATGACCAATCCTAATTGGGCTACTCAAACTCCACTCAACAATGACGTGGGATTTGAAAATTATGAGCTTAATAATCATTTGCAGATTCCATCATTTGGTGTTGCTCTTAATCATCATGTCCAAATGGAAAATAAAAATCAATATGACCCAAATAGCCACAAAATTTCAACCTCATTCCATGATTGGTCCAGTAACCTTTAG 639 0.3991 MSVTLRFDGDVAGENRKLKRKMEDAIAPDSEVSLSLSLGGGGRGGSSFKSLKSHVELREYPCNFCNKKFSSSQALGGHQNAHRRERFLSRMEKEIQLGTFGLGAHHFCPYPNHHQYPFTTGLSPFYHGIGWPQYVAPTSYGNPFGIMTNPNWATQTPLNNDVGFENYELNNHLQIPSFGVALNHHVQMENKNQYDPNSHKISTSFHDWSSNL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1995 212 Pfam C2H2-type zinc finger 60 85 - -
Mal4g1995 212 SUPERFAMILY beta-beta-alpha zinc fingers 58 87 IPR036236 -
Mal4g1995 212 PANTHER ZINC FINGER PROTEIN JAGGED 1 205 IPR045320 GO:0003700
Mal4g1995 212 Gene3D Classic Zinc Finger 46 99 - -
Mal4g1995 212 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 1 205 - -
Mal4g1995 212 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Mal4g1995 212 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 87 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1995 Mal-Chr4 42101555 42102193 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1995 56 132 C2H2 Transcription Factor Family AT1G67030 42.308 2.72e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal4g1995 zf-C2H2_6 1.3e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1995 - - mtr:MTR_2g067740 284.648