Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1994 ATGTCAGAAACACTACGATTTGGTGGTGATGTTGCGGGAGAGAACAGAAAGCTAAAGCGTAAGATGGAAGATGCTATTGCTCCTGATTCAGAGGTGTCCCTTTCTTTGAGTTTAGGTGGAGGCGGAAGAGGAGGATCTTCGTTCAAATCCTTCAAGAGCCATGTGGAGTTGAGGGAATACTCATGTAATTTTTGCAACAAGAAGTTTTCATGTTCACAAGTCTTGGGGGGACACCAAAATGCCCATAGGCGTGAAAGGTTTCTTTCAAGAATGGAGAAAGAAATTCAATTGGGAACCTTTGGACTTGGTGCTCATCATTTTTGTCCATACCCAAATCATCATCAATATCCCTTTACAACTGGGTCATCACCTTTTTATCATGGAATTGAATGGCCTCAATATGTTGCCCCTACAAGCTATGGAAACCCATTTGGGATAATGACCAATCCTAATTGGGCTACTCAAACTCCACTCAACAATAACTTGGTATTTGAAAATTATGAGCTTAATAATCATTTGCAGATTCCATCATTTGGTGTTGCTCTTAATCATCATGTCCAAATGGAAAATAAAAATCAATATGACCCAAATAGCCACAAAATTTCGACCTCATTCCATGATTTGTCCCGTAACCTTTAG 639 0.3975 MSETLRFGGDVAGENRKLKRKMEDAIAPDSEVSLSLSLGGGGRGGSSFKSFKSHVELREYSCNFCNKKFSCSQVLGGHQNAHRRERFLSRMEKEIQLGTFGLGAHHFCPYPNHHQYPFTTGSSPFYHGIEWPQYVAPTSYGNPFGIMTNPNWATQTPLNNNLVFENYELNNHLQIPSFGVALNHHVQMENKNQYDPNSHKISTSFHDLSRNL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1994 212 PANTHER ZINC FINGER PROTEIN JAGGED 1 205 IPR045320 GO:0003700
Mal4g1994 212 MobiDBLite consensus disorder prediction 191 212 - -
Mal4g1994 212 Gene3D Classic Zinc Finger 46 99 - -
Mal4g1994 212 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 87 IPR013087 -
Mal4g1994 212 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 1 205 - -
Mal4g1994 212 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Mal4g1994 212 SUPERFAMILY beta-beta-alpha zinc fingers 58 87 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1994 Mal-Chr4 42071871 42072509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1994 50 148 C2H2 Transcription Factor Family AT5G01860 35.577 1.60e-11 59.7