Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1967 ATGGGAGCACTTAGCACATACTTCAACTATAATTGTTACCCTTATCAACCTATTCAAACTACTAACAACTTAGAAATCACCACTTTTCAACATCATCATGAACAAGAACAACTTGTGCAACAAAACCACCATTTTCCATCTTACTTGAATGAAACTTCTCTTTTAGATGAAAGTTTCATTTTTCAAAGTCCTTGTTTTTACTCAAATGAGACTTATAACCCTTGTCAAGAGCAACTACTTGTTGACTCCACTTTCTCTTCTCAAAATGATGGCTTTGTTTCAATGAATGAAATTTTCCCAAATGATGAAGATTTCAACAACTACCTTCCATGTGGAAAACGCCAAAAGCTATGCTATGAGGAGAAAAGAGAAGTGCCACAACAAGAGCTTTTGAACTCAACCAATTTTTTTGTGGATGAGTTTATGACTAACCCTTTTGCTTCATTTGAAGCAGAACCTGGTTCTGCTTCAAAAGTTGTTGATGTTGTTCAATGTGAGAAGAAAGTTACCGAAAGGACTATCTCGTCGCAGAGTATTGCGGCGAGAGAAAGAAGAAGAAAGATAACTGAGAAGACACAAGAGCTTGGTAAGTTGGTTCCTGGTGGACCTAAGATGAACACAGCAGAGATGCTTAATGCTGCTGCTAATTATGTCAAGTTTCTTCAAGCTCAAGTTGGAATGCTTCAACTTATGGAAACATTTAGCAAGGAAGAAAAGGAACCTCCTCCAAGTGAAGATCTACACAACCTACTTGTTTCTCCTTTTGTTCAAGAGAAATTATATTCAGAAGAAAAGTGCTTTGTTCCAAAAGAGTTTGTCACCACATTGACAAATTATGATGATGTTCAATCAAAACCAACCATCCTTAAGGGTCTGAAACAGCTTATTGGAACTGAGATTGAGAAGAAACCAAAGCAAGAATAG 924 0.368 MGALSTYFNYNCYPYQPIQTTNNLEITTFQHHHEQEQLVQQNHHFPSYLNETSLLDESFIFQSPCFYSNETYNPCQEQLLVDSTFSSQNDGFVSMNEIFPNDEDFNNYLPCGKRQKLCYEEKREVPQQELLNSTNFFVDEFMTNPFASFEAEPGSASKVVDVVQCEKKVTERTISSQSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLNAAANYVKFLQAQVGMLQLMETFSKEEKEPPPSEDLHNLLVSPFVQEKLYSEEKCFVPKEFVTTLTNYDDVQSKPTILKGLKQLIGTEIEKKPKQE* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1967 307 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 2 293 - -
Mal4g1967 307 Pfam Helix-loop-helix DNA-binding domain 178 222 IPR011598 GO:0046983
Mal4g1967 307 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 2 293 - -
Mal4g1967 307 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 174 232 IPR036638 GO:0046983
Mal4g1967 307 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Mal4g1967 307 SMART finulus 178 227 IPR011598 GO:0046983
Mal4g1967 307 Gene3D - 170 240 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1967 Mal-Chr4 40563226 40565318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1967 134 300 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 44.118 1.06e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal4g1967 HLH 2.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1967 - - mtr:MTR_1g060700 529.635