Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1909 ATGCTGACAAACCCTCAAGGTTTAGAGCTATGGAGATCATCATATTTTTCTTTAGGTAGAATTTCAAGAGGACTAATGAAGGATGATGGAAATTTTCTATTACAAGACCAAAATTCTGTTGTATTATGGCAGAGTTTCAGTCATTTTAGTGACACATTAGTTCCTGGTCAAGAATTGAATTCGAATAAATATCTTTATTCTCGAAAAGGAGAATTCAATTTCTCACGCGGAAAGTTTGAACTTCACCTACAAGAAAATGGAGATGTGCTCCTCAACCTTATAGATTTGCATACAGATGCAAACTACAGTACTCAATCTGATGCTTACTTTGATAGTGGCATTGTTGATCCTGAAAATGAATCACCAAATGTTGGTAAGAAATTTATATTTGACAAGTCAGGATTGTTCTTATACATATTGAAAAATGATGGGACAAAGTTTAAAATAATCACCAATCCAAATGAGAAAATTTCAAATAATGGCTTCTACTACAAAGCAACAATTAATTATGATGGAGTTTTCACCCTTTCATACTACCCTAAAGATAAAAAAAAGGGTCAAAGATGGTTTGTTGCGAAGACAATACCAGAAAACATTTGTTTGAATTCGACATTTAATAATGGTCAAAGTATTTGTGGGTTCAATAGCATTTGCAACCTTAGAGATGACCGAAGGCCGATGTGTAATTGTCTAGACGGATATTCTCTAATCGATTCAAACAACATGTATGGTGGTTGCGTGTCAAATTCCCAAGTCATATGTCAAGGTAGAAAAATGATACTCTATCATCTCTTGATAATAAAACAAAAAAGAAAAAAAGGTCATGATACTTTGAACATTGTGATATCAATTCTTTTAGGAATCTCTGTTGTTATAATTGTAGGATTGGTTTGTACAATTTGCTTTGGGCACAACTACAAGAAGATCAAAAGCAGTGCAACCAAAAGAAGTGTTGTTGACAAAAATTTGCGAATTTTTACCTTCAAAGAAATTATAGAAATAACAAACAACTTTAGAGATGAATTAGGAAGAGGGTCTTGTAGCATTGTATACAAAGGAACAATAGATATGGATACTAGTGTGGCTATTAAGAAATTGGACAAGTTGTTCCAAGATAGTGATAAGGAATTTCAAACTGAAATGAATGTGATAATCCAAACTCATCATAGGAATCTTGTTAGTCTTCATGGATATTGTAGTGAGGAACAACATAGGATTTTGGTGTATGAGTTGATGAGTAATGGTACTTTAGCAAGCTTCCTTTTCACTCCTTTGAAACCAAATTGGAACCAACGAGTTCATATTGCCATTGGGATTGCAAGAGGTCTTGTTTACTTGCATGAGGAATGTTGCACACAAATCATCCATTGTGACATAAAGCCACAAAACATACTTCTAGATGATGAATACAATGCTAATATTTCTGATTTTGGTTTAGCAAAATTATTATTGATTAATCAAAGTCACACTAAAACTGGAATTAGAGGAACCAAAGGGTATGTTGCACCAGACTGGTTTAGGAATGCACCAATCAGTGCTAAGGTTGATACTTACAGTTTTGGTGTGTTGCTACTAGAGATAATTTGTTGTAGAAAAAATGTAGAGAATGATAATGTAAGTGAAGAAAAGAGGATTTTAACTGATTGGGCTTATGATTCTTACAAGGCTAATAATTTGTACCTTCTAGAAAATGAATGTGAGGTTGTCAATGATATGAGTAGAGTGGAAAAATTTGTCAAGATTGCTATTTGGTGCACTCAAGAAGATCCATCTCTTAGACCAACAATGAAGAAGGTTTTGCTAATGCTAGAAGAGATTGTTGAAGTTGCAATTCCTCCTAGTCCTTATCTCTATGGTTCTTTTAGTTGA 1869 0.336 MLTNPQGLELWRSSYFSLGRISRGLMKDDGNFLLQDQNSVVLWQSFSHFSDTLVPGQELNSNKYLYSRKGEFNFSRGKFELHLQENGDVLLNLIDLHTDANYSTQSDAYFDSGIVDPENESPNVGKKFIFDKSGLFLYILKNDGTKFKIITNPNEKISNNGFYYKATINYDGVFTLSYYPKDKKKGQRWFVAKTIPENICLNSTFNNGQSICGFNSICNLRDDRRPMCNCLDGYSLIDSNNMYGGCVSNSQVICQGRKMILYHLLIIKQKRKKGHDTLNIVISILLGISVVIIVGLVCTICFGHNYKKIKSSATKRSVVDKNLRIFTFKEIIEITNNFRDELGRGSCSIVYKGTIDMDTSVAIKKLDKLFQDSDKEFQTEMNVIIQTHHRNLVSLHGYCSEEQHRILVYELMSNGTLASFLFTPLKPNWNQRVHIAIGIARGLVYLHEECCTQIIHCDIKPQNILLDDEYNANISDFGLAKLLLINQSHTKTGIRGTKGYVAPDWFRNAPISAKVDTYSFGVLLLEIICCRKNVENDNVSEEKRILTDWAYDSYKANNLYLLENECEVVNDMSRVEKFVKIAIWCTQEDPSLRPTMKKVLLMLEEIVEVAIPPSPYLYGSFS* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1909 622 CDD STKc_IRAK 342 606 - -
Mal4g1909 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Mal4g1909 622 SUPERFAMILY Protein kinase-like (PK-like) 318 604 IPR011009 -
Mal4g1909 622 Gene3D Phosphorylase Kinase; domain 1 299 411 - -
Mal4g1909 622 Gene3D Transferase(Phosphotransferase) domain 1 412 611 - -
Mal4g1909 622 SUPERFAMILY alpha-D-mannose-specific plant lectins 6 64 IPR036426 -
Mal4g1909 622 SMART serkin_6 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1909 622 ProSiteProfiles Protein kinase domain profile. 336 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1909 622 Pfam Protein kinase domain 340 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1909 622 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 257 - -
Mal4g1909 622 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 265 621 - -
Mal4g1909 622 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 257 - -
Mal4g1909 622 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 265 621 - -
Mal4g1909 622 Gene3D - 49 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1909 Mal-Chr4 36697558 36699670 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1909 322 604 Receptor kinase-like Gene Family AT1G60800 42.268 3.53e-68 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal4g1909 Pkinase 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1909 - - mtr:MTR_2g067970 1063.91