Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1906 ATGGTGCCACTGATCTTGCTAAGATGGAAGACAACGGTTGGAGTAGTTGTGATACAGTGGAATGTGGTTGTTCTTTGTCGAAGCAGGGTGATCCTAGTAAATGGTTATAACGTCCCAATGGATGTGGTTCTGTTAGGTGGTTCAGGAAAGTGTAACACCACAGGTTGTTCTGCAAATCTGAACGCAGTGTGCCCAACGGAGTTGAAGGTAGCGGAAAATGAGACTGTTGCTGGCTGTCAAGGTCCTTGTAATGCTTTTAATTTGCAGATTTTTTGTTGCCGTGGGGATCATTCAACTGCTGACACTTGTGAGCCGAGTGTGTATGCTCAAATATTCAAGGCAACATGCCCTCAAGCCCATAGCTATCCGTACGACAATGATAATAGCACGTTCACCTGTCCAACCACCGATTACAACGTCGTCTTTTGTCCTGCCTCCAATAATGCCAGACTACAAGGTGGGAGTGTGAGTATTGGTGAATCACTTACTGCTGGGAGTGAAACAACTCGATGGCTCTCTCCTTCAGGAGATTTTGCATTTGGATTTTACCAACTTCCTGATGAGCTTTACTTACTAGCTATATGGTATGACAAGATACAAAATGATGCCATAATTTGGTATGCAAATGGAGACAACCTTGCTCCAAAGGGATCAACATTGGTATTAAATGATTCTCGTGGCTTGGTGTTGACTAACCCTCAAGGTTTAGAGATATGGAGATCATATTTCACATTAGGTACTATCTCTAATGGTCTAATGAGTGATGATGGAAACTTTCAATTGCAAGACAAAAGTTCCGTGGCAATATGGGACAGTTTTAGCCATCCTACTGACACATTAGTCCCTAATCAAGTAATGGAGTTAAATGGGCATCTTTCTTCACGACAAGGAGCCTTAAACTTCTCACATGGAAGGTTCAAATTTCATCTACAGGAGGATGGAAATCTTGTGCTTAACATTATAAACTTACCAAGTAACTATAGTTATGATCCTTACTACAATACTGGCACCAATGATGATAAGAATCAAACAAATGCAACAATTAATTATGATGGAGTTTTCACCATTGCATTTTACCCTAAAGATCCAAAGAGTGGACAAAGTTGGGTCATTGCAAAAACAATACCAGAAAACATATGTTTGTATGCTACATTCCGAGGTGAAGGTGTATGTGGTTTAAATAGCATTTGCACACTTACAAATGACCAAAGGCCAAATTGTACTTGCCCAGACGAATATTCTCCGATTGATTCAAATAACATGTATGCTGGTTGCATACCAAATGTTCAAGTTATTTGTCAAGCAAGTGGGAATTTGGGTTCACCAGATAATCTATTTACAATGAAGGATTTACCAAACACTGATTGGCCTGAATCTGATTATGAAAAAATAAGTCCATCTAATTTACAAGAATGCAAGGAATCGTGTTTGCAAGATTGCTTATGTGTTCTGGTTCATTTTGACCAAAGTTCCTGCTGGAAAAAGAAACTCCCACTATCTTATGGTAGAAATGATCCGACGGTAAAAGGTATTTCTATCATGAAATTGATGAAAAGTGATCATTTGTCCTCCTTGTCAAAAGAGAAGAAAGATCATAATACTTTGGTCATTGTGATTTCAGTTCTTTTGGCAATCTCTATGTTTCTCATTTTAACACTGTTCGGGGCAATGTTTTTTGGATTCCCCTACAACCGCAAAAAGATTAAAAGTAGTGGAAACCACCAAAGATTTGTTGACAATAACTTGCACAGTTTTAGCTTCAAGGAAATTGTGGAAGTAACAAATAACTTTAGAGAAGAATTAGGAAGAGGGTCTTGTAGCATTGTCTACAAAGGAACAATAGAGATGATGATCAATGTGGCAGTTAAGAAACTAGATAAGTTGATCCAAGATAGTGATAAGGAATTTAAGACTGAAATGAGTGTGATAGGCCAAACTCATCATAGGAACCTTGTTCGTCTTCTTGGATATTGCAATGAGGGACAACATCGGATTTTGGTATACGAGTTAATGAGTAATGGCACTTTAGCAAGCTTTCTTTTCACCCCTTTAAAGCCAAAGTAA 2064 0.3866 MVPLILLRWKTTVGVVVIQWNVVVLCRSRVILVNGYNVPMDVVLLGGSGKCNTTGCSANLNAVCPTELKVAENETVAGCQGPCNAFNLQIFCCRGDHSTADTCEPSVYAQIFKATCPQAHSYPYDNDNSTFTCPTTDYNVVFCPASNNARLQGGSVSIGESLTAGSETTRWLSPSGDFAFGFYQLPDELYLLAIWYDKIQNDAIIWYANGDNLAPKGSTLVLNDSRGLVLTNPQGLEIWRSYFTLGTISNGLMSDDGNFQLQDKSSVAIWDSFSHPTDTLVPNQVMELNGHLSSRQGALNFSHGRFKFHLQEDGNLVLNIINLPSNYSYDPYYNTGTNDDKNQTNATINYDGVFTIAFYPKDPKSGQSWVIAKTIPENICLYATFRGEGVCGLNSICTLTNDQRPNCTCPDEYSPIDSNNMYAGCIPNVQVICQASGNLGSPDNLFTMKDLPNTDWPESDYEKISPSNLQECKESCLQDCLCVLVHFDQSSCWKKKLPLSYGRNDPTVKGISIMKLMKSDHLSSLSKEKKDHNTLVIVISVLLAISMFLILTLFGAMFFGFPYNRKKIKSSGNHQRFVDNNLHSFSFKEIVEVTNNFREELGRGSCSIVYKGTIEMMINVAVKKLDKLIQDSDKEFKTEMSVIGQTHHRNLVRLLGYCNEGQHRILVYELMSNGTLASFLFTPLKPK* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1906 687 Pfam D-mannose binding lectin 204 290 IPR001480 -
Mal4g1906 687 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 75 346 - -
Mal4g1906 687 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 345 686 - -
Mal4g1906 687 Gene3D Phosphorylase Kinase; domain 1 560 670 - -
Mal4g1906 687 ProSiteProfiles Bulb-type lectin domain profile. 147 274 IPR001480 -
Mal4g1906 687 SUPERFAMILY Protein kinase-like (PK-like) 573 683 IPR011009 -
Mal4g1906 687 ProSiteProfiles Thaumatin family profile. 30 144 IPR001938 -
Mal4g1906 687 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 75 346 - -
Mal4g1906 687 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 345 686 - -
Mal4g1906 687 SMART tha2 9 144 IPR001938 -
Mal4g1906 687 Gene3D - 151 275 IPR036426 -
Mal4g1906 687 SMART blect_4 161 276 IPR001480 -
Mal4g1906 687 Gene3D - 276 357 IPR036426 -
Mal4g1906 687 ProSiteProfiles Protein kinase domain profile. 595 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1906 687 Gene3D Thaumatin 28 144 IPR037176 -
Mal4g1906 687 Pfam Protein tyrosine and serine/threonine kinase 597 680 IPR001245 GO:0004672|GO:0006468
Mal4g1906 687 Pfam Thaumatin family 30 144 IPR001938 -
Mal4g1906 687 SUPERFAMILY alpha-D-mannose-specific plant lectins 203 338 IPR036426 -
Mal4g1906 687 SUPERFAMILY Osmotin, thaumatin-like protein 32 144 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1906 Mal-Chr4 36609888 36620890 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1906 582 687 Receptor kinase-like Gene Family AT5G38280 35.514 4.27e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal4g1906 Thaumatin 8.2e-34 CL0293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1906 - - mtr:MTR_2g067980 1093.18