Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1883 ATGGTGAAGTTCACAGCTGATGAGTTGCGTCGCATTATGGACCACAAGCACAATATTCGTAATATGTCTGTCATTGCTCATGTTGATCACGGAAAATCAACTTTGACAGATTCCCTTGTTGCTGCCGCTGGAATTATTGCTCAAGAGGTTGCTGGTGATGTTCGGATGACAGATACCCGTGCAGATGAAGCTGAACGTGGTATCACTATTAAGTCCACCGGTATCTCTCTATACTATGAAATGAGTGACGAGTCTCTGCATAGTTTTAAGGGGGAGCGCAATGGGAATGAGTATCTCATTAATCTCATTGATTCCCCTGGGCACGTTGACTTCTCATCCGAGGTTACTGCTGCACTTCGAATTACTGATGGAGCACTAGTGGTGGTTGATTGTGTCGAGGGGGTTTGTGTGCAGACTGAAACTGTGCTGCGACAGGCTCTTGGAGAAAGGATCAGGCCGGTTCTGACTGTTAATAAGATGGACAGATGCTTCCTTGAGCTCCAGGTGGATGGAGAGGAGGCTTATCAGACCTTCTCGAGAGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAAGATCCGTTGCTTGGTGATGTTCAAGTGTATCCTGAGAAAGGAACAGTTGCTTTCTCTGCTGGTTTGCACGGTTGGGCTTTTACTCTGACCAACTTCGCAAAGATGTATGCCTCCAAATTTGGTGTTGATGAGACAAAGATGATGGAGAGGCTTTGGGGTGAAAATTTCTTCGATCCAGCCACTAAGAAATGGACCACCAAGAATACTGGTTCAGCTACTTGCAAGCGTGGGTTTGTTCAGTTCTGTTATGAGCCTATCAAGCAGGTCATTAACACTTGTATGAATGATGAAAAAGATAAGTTGTGGCCGATGTTGACAAAGCTAGGAATCACCATGAAATCAGAGGAAAAGGACTTGATGGGTAAGCCTTTGATGAAACGTGTCATGCAGACATGGCTCCCAGCAAGCACTGCACTTCTTGAAATGATGATCTTTCATCTCCCCTCTCCATCTACAGCTCAGAGGTATCGTGTTGAGAATTTGTATGAGGGTCCCCTTGATGATCAATATGCTACTGCTATCAGAAACTGTGACCCTGAAGGACCTCTCATGCTTTATGTCTCAAAGATGATTCCCGCTTCTGATAAAGGAAGGTTTTTTGCTTTTGGTCGTGTATTTGCTGGTAAAGTTTCAACTGGTTTGAAGGTCAGAATTATGGGACCAAATTATGTCCCTGGTGAGAAGAAAGATTTGTATGTGAAAAGTGTTCAGAGAACTGTTATTTGGATGGGAAAGAGACAAGAAACTGTTGAGGACGTGCCTTGTGGTAACACAGTTGCTATGGTTGGTTTGGATCAATTCATTACCAAGAATGCTACATTGACAAATGAGAAGGAAGTTGATGCACACCCTATTCGTGCCATGAAGTTTTCTGTCTCACCTGTTGTGCGTGTTGCTGTTCAGTGCAAGGTTGCTTCAGATCTTCCTAAGCTTGTTGAAGGTCTCAAACGTCTTGCTAAGTCAGATCCTATGGTTGTTTGTACTATTGAGGAGTCTGGAGAACACATTGTTGCTGGTGCAGGAGAGCTTCATCTTGAGATCTGTTTGAATGATTTGCAGGATTTCATGGGTGGTGCTGAGATTTTTAAATCCGACCCTGTTGTGTCATTCAGAGAGACTGTTCTAGAGAGATCATGCCGCACTGTGATGAGTAAATCACCCAACAAGCACAACAGATTGTATATGGAAGCAAGACCTTTGGAGGATGGGCTTGCAGAGGCCATTGATGATGGCCAGATTGGACCAAGGGATGACCCTAAGAATCGTTCCAAACTCTTGTCAGAAAAGTACGGTTGGGATAAGGATCTTGCCAAGAAAATCTGGTGTTTTGGACCCGAGACCACTGGACCCAACATGGTGGTTGATATGTGTAAGGGAGTGCAATACTTGAATGAAATCAAGGATTCTGTTGTTGCTGGATTCCAGTGGGCATCAAAAGAAGGTGCTTTGTCTGAAGAAAACATGAGAGCCATTTGCTTTGAAGTATGCGATGTTGTCCTCCACACGGATGCTATCCACAGAGGAGGTGGTCAGATCATTCCTACTGCTAGGAGAGTCTTCTACGCCTCACAGCTTACAGCTAAGCCCAGACTTCTTGAGCCTGTTTACATGGTGGAAATCCAAGCTCCTGAGCAAGCTCTTGGTGGTATCTACAATATTCTTAACCAGAAACGTGGACATGTTTTTGAAAATATTCAGAGGCCTGGTACTCCACTTTACAACATCAAAGCATACCTTCCTGTCATCGAGTCCTTTGGATTCTCCAGCCAATTGAGGGCTGCAACATCAGGGCAGGCTTTCCCTCAGTGCGTGTTTGACCATTGGAATATGATGTCATCAGATCCATTGGAGGCTGGGTCACAAGCTGCACAACTTGTGACCGATATTCGCAAGAGGAAGGGTTTGAAGGAGCAGATGACACCTCTCTCTGAGTTTGAAGATAAGCTTTAA 2529 0.4456 MVKFTADELRRIMDHKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMSDESLHSFKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDETKMMERLWGENFFDPATKKWTTKNTGSATCKRGFVQFCYEPIKQVINTCMNDEKDKLWPMLTKLGITMKSEEKDLMGKPLMKRVMQTWLPASTALLEMMIFHLPSPSTAQRYRVENLYEGPLDDQYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFAGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLNDLQDFMGGAEIFKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPLEDGLAEAIDDGQIGPRDDPKNRSKLLSEKYGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALSEENMRAICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYMVEIQAPEQALGGIYNILNQKRGHVFENIQRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWNMMSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSEFEDKL* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1883 842 Gene3D - 569 721 IPR014721 -
Mal4g1883 842 PANTHER - 1 841 - -
Mal4g1883 842 Pfam Elongation factor G C-terminus 723 810 IPR000640 -
Mal4g1883 842 Gene3D - 722 842 - -
Mal4g1883 842 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 841 - -
Mal4g1883 842 PRINTS GTP-binding elongation factor signature 101 111 IPR000795 GO:0003924|GO:0005525
Mal4g1883 842 PRINTS GTP-binding elongation factor signature 65 73 IPR000795 GO:0003924|GO:0005525
Mal4g1883 842 PRINTS GTP-binding elongation factor signature 153 162 IPR000795 GO:0003924|GO:0005525
Mal4g1883 842 PRINTS GTP-binding elongation factor signature 117 128 IPR000795 GO:0003924|GO:0005525
Mal4g1883 842 PRINTS GTP-binding elongation factor signature 21 34 IPR000795 GO:0003924|GO:0005525
Mal4g1883 842 Gene3D Elongation Factor G (Translational Gtpase), domain 3 486 562 - -
Mal4g1883 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 341 IPR027417 -
Mal4g1883 842 CDD aeEF2_snRNP_like_IV 558 729 - -
Mal4g1883 842 SUPERFAMILY Translation proteins 342 476 IPR009000 -
Mal4g1883 842 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 IPR031157 -
Mal4g1883 842 Gene3D - 3 237 IPR027417 -
Mal4g1883 842 CDD EF2_snRNP_III 487 558 - -
Mal4g1883 842 Pfam Elongation factor G, domain IV 605 721 IPR005517 GO:0005525
Mal4g1883 842 SUPERFAMILY EF-G C-terminal domain-like 484 559 IPR035647 -
Mal4g1883 842 TIGRFAM small_GTP: small GTP-binding protein domain 20 176 IPR005225 GO:0005525
Mal4g1883 842 Pfam Elongation factor Tu GTP binding domain 17 342 IPR000795 GO:0003924|GO:0005525
Mal4g1883 842 CDD eEF2_snRNP_like_C 726 804 - -
Mal4g1883 842 CDD EF2 20 230 - -
Mal4g1883 842 Pfam Elongation Factor G, domain III 487 547 IPR041095 -
Mal4g1883 842 SUPERFAMILY Ribosomal protein S5 domain 2-like 561 725 IPR020568 -
Mal4g1883 842 Gene3D Translation factors 343 484 - -
Mal4g1883 842 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 17 344 IPR000795 GO:0003924|GO:0005525
Mal4g1883 842 SMART EFG_IV_2 605 721 IPR005517 GO:0005525
Mal4g1883 842 Pfam Elongation factor Tu domain 2 394 467 IPR004161 GO:0005525
Mal4g1883 842 CDD EF2_II 375 470 - -
Mal4g1883 842 SMART EFG_C_a 723 812 IPR000640 -
Mal4g1883 842 SUPERFAMILY EF-G C-terminal domain-like 726 837 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1883 Mal-Chr4 35926170 35929321 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1883 1 842 Eukaryotic Initiation Factors Gene Family AT1G56070 92.408 0.0 1645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1883 K03234 - gmx:100804251 1614.36