Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1857 ATGAAGGATGATGGAAATTTTCAATTACGAGACCAAAATTTTATTGTACTATGGGAGAGTTTCGATCATTCTAGTGACACATTAGTTCCTGGTCAAGAATTTTATCCAAATGACTATCTTTATTCTCGACAAGGAGAATTCAACTTCTCACGTGGAAGGTTTGAACTTCGCATACAAAAAACTAATGGGGATGTTTTGCTCCTAAACCTGATAAATTTGCATAACCACACTACTCAGCGAAAAGCTTACTATGATAGTGGCAATGTTGATCCTGATAACGAATCATCAAATGTTGGCCACAGATTTATATTTGACAAGTCAGGATTGTTCTTATACATATTGAAAAAGAATGGGACAATGTTTAAAATAATCACCAATCTAAATAAGACAATTTCAAAGGATGGCTTCTACTTCAAAGCAACAATCAATTATGATGGCGTTTTTACCCTCTCATATTATCCAAAAAATGGTCAAAGTTGGGTCGTTGCAAACACAATACCAGAGAACATTTGTTTGGATTCTACATTTAACAATGATCAAGGTATTTGTGGGTTGAATAGCATTTGTACCCTTAGAGATGACCGAAGGCCGATGTGTACTTGTCTAGACGGATATTCTCTAATTGACTCAAATAACATGTATGGTGGTTGCATAGAAAATGACAAAGTCATTTGTAAAGGTAGGCATCAAGGATCACAAAATGATACACATGTGATGATGAACTTGCCCAATACTTATTGGCCTAACTCTGGTTATGAAACATTGAGTCCTCGTAGTCTTGAAGAATGCAAAGAATCTTGTTTGCAGGATTGCTTATGTGTATTGGTTTCTTTTGATGAAAACTCTTGTTGGAAGAAGAAGCTACCACTCTCACAGGGGAGACAAGATCCGACTCTAAAAGGAATTTCTATCATGAAAATGAAGAAAAATGATACTATACGATCCCTCCCCAATGCGACGAAAGATCATGATGATAAAATGAAAGAGAAGAAAGTTCATAATACTTTGATCATTGTGATATCAACTATTTTGGGAATCCTTGTGGTTATATTTTTATCATTTATTAGTGCAATTTTTTTTTGGGTCAACCACAAGAAGATCAAAAGTAGTGCAACCAACAAAAGTGTTCATGGAAATTTGAGAATTTTTACCTTCAAGGAAATTACAGAAGCAACAAACAACTTTACAGAAGAATTAGGAAGGGGGTCTTGTAGCATTGTATACAAAGGAACAATAAATGTGGATACTAATGTGGCTATTAAGAAATTGGACAAGTTGTTCCAAGATAGTGATAAGGAATTTCAAACTGAAATGAATGTGATTATCCAAACTCATCATAGGAATCTTGTTCGTCTTCATGGATATTGTAGTGAGGAACAACATAGGATTTTGGTGTATGAGTTGATGAGTAATGGTACTTTAGCAAGCTTCCTTTTCACTCCTTTGAAACCAAATTGGAACCAACGAGTTCATATTGCCATTGGGATTGCAAGAGGTCTTGTTTACTTGCATGAGGAATGTTGCACCCAAATCATCCATTGTGACATAAAGCCACAAAACATACTTCTAGATGATGATTACAATGCTAAGATTTCTGATTTTGGTTTAGCAAAGTTATTATTGATTAGTCAAAGTCACACTAAAACTGGAATTAGAGGAACCAAAGGGTATGTTGCACCAGATTGGTTTAGGAGTGCACCGATCAGTACTAAGGTTGATGCTTATAGTTTTGGTGTGTTGTTACTAGAGATAATTTGTTGTAGAAAAAATGTAGAGAATGATAATGTAAGTGAAGAAAAGAGGATTTTAACTGATTGGGCATATGATTGCTACAAGGTTAAAAAATTGGACATTCTTCTAGAAAATGAATGTGAAGCTGTGAATGATATGACTAGAGTGGAAAAATATGTCATGATTGCTATTTGGTGCACTCAAGAAGATCCATCTCTTAGGCCAACAATGAAGAAGGTTTTGCTAATGCTAGAAGAAATTGTTGAAGTAGCAATTCCTCCAAGTCCCTACCTCTATGGTTCTTTTGGTTCAAATTGA 2049 0.3499 MKDDGNFQLRDQNFIVLWESFDHSSDTLVPGQEFYPNDYLYSRQGEFNFSRGRFELRIQKTNGDVLLLNLINLHNHTTQRKAYYDSGNVDPDNESSNVGHRFIFDKSGLFLYILKKNGTMFKIITNLNKTISKDGFYFKATINYDGVFTLSYYPKNGQSWVVANTIPENICLDSTFNNDQGICGLNSICTLRDDRRPMCTCLDGYSLIDSNNMYGGCIENDKVICKGRHQGSQNDTHVMMNLPNTYWPNSGYETLSPRSLEECKESCLQDCLCVLVSFDENSCWKKKLPLSQGRQDPTLKGISIMKMKKNDTIRSLPNATKDHDDKMKEKKVHNTLIIVISTILGILVVIFLSFISAIFFWVNHKKIKSSATNKSVHGNLRIFTFKEITEATNNFTEELGRGSCSIVYKGTINVDTNVAIKKLDKLFQDSDKEFQTEMNVIIQTHHRNLVRLHGYCSEEQHRILVYELMSNGTLASFLFTPLKPNWNQRVHIAIGIARGLVYLHEECCTQIIHCDIKPQNILLDDDYNAKISDFGLAKLLLISQSHTKTGIRGTKGYVAPDWFRSAPISTKVDAYSFGVLLLEIICCRKNVENDNVSEEKRILTDWAYDCYKVKKLDILLENECEAVNDMTRVEKYVMIAIWCTQEDPSLRPTMKKVLLMLEEIVEVAIPPSPYLYGSFGSN* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1857 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672|GO:0006468
Mal4g1857 682 Gene3D Phosphorylase Kinase; domain 1 365 468 - -
Mal4g1857 682 SMART serkin_6 393 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1857 682 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 681 - -
Mal4g1857 682 CDD STKc_IRAK 399 664 - -
Mal4g1857 682 Pfam Protein kinase domain 396 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1857 682 Pfam S-locus glycoprotein domain 133 206 IPR000858 GO:0048544
Mal4g1857 682 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 39 IPR036426 -
Mal4g1857 682 SUPERFAMILY Protein kinase-like (PK-like) 374 670 IPR011009 -
Mal4g1857 682 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 681 - -
Mal4g1857 682 Gene3D Transferase(Phosphotransferase) domain 1 469 669 - -
Mal4g1857 682 ProSiteProfiles Protein kinase domain profile. 393 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1857 Mal-Chr4 35288960 35291008 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1857 356 662 Receptor kinase-like Gene Family AT1G60800 41.121 3.44e-74 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal4g1857 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1857 - - mtr:MTR_2g067980 919.072