LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal4g1834	ATGACTAGTTTTGTTGTCACATTGGTGGTGCTGCTAAGCACAATATGTGATGCACAATTGTCTTCTACGTTTTACGACAGTGCATGCCCTAATGCACTAAGCACTATCAGAACTGCGATTCGTACTGCTGTCTCTAAGGAACGTCGTATGGCTGCATCTCTCATTCGCCTTCATTTTCATGATTGCTTTGTCCAAGGTTGTGATGCATCAATTTTGCTAGACGAGACCTCCACAATTGAGAGTGAAAAGAGTGCACTTCCAAATGTTAACTCAGTAAGAGGATTTGAAGTCATTGATAAAGCAAAAGCTGATGTGGAGAAAGTATGCCCTGGAGTTGTGTCTTGTGCTGACATTGTAGCAGTAGCAGCACGTGATGCATCGTTTGCTGTGGGTGGTCCATCATGGACAGTGAAACTTGGACGAAAAGACTCTACCACAGCAAGCAAAAGTTTGGCCAATACAGACCTTCCATTATTTACAGATGATCTTCAAACTCTTATATCCCATTTTACAAACAAAGGTCTCACCGCCAAAGACATGGTTACACTATCTGGTGCACACACAATCGGAGAAGCTCAATGCTTCACATTTCGTGGTAGGATATACAACAATGCAAGTGACATAGATGTTGGATTTGCTAGCACTCGCCAACGTGGTTGTCCATCGTTAACTACCACCGCAAACAATCAAAAGTTGGCCGCATTGGACTTGGTTACACCAAATTCTTTTGACAACAACTACTTTAAGAATTTAATTCAGAAGAAGGGTCTTCTTCAATCAGATCAAGTTTTGTTCAGCGGAGGATCTACAGATTCCATTGTTTCTGAGTATAGCAAAAATCCTACGAGTTTCAAATCTGATTTTGCAGCTGCTATGATAAAGATGGGAGATATCAAACCCTTAACTGGATCGGATGGAGTCATAAGAAGGATATGCAGTGCTATCAACTAA	951	0.4143	MTSFVVTLVVLLSTICDAQLSSTFYDSACPNALSTIRTAIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLDETSTIESEKSALPNVNSVRGFEVIDKAKADVEKVCPGVVSCADIVAVAARDASFAVGGPSWTVKLGRKDSTTASKSLANTDLPLFTDDLQTLISHFTNKGLTAKDMVTLSGAHTIGEAQCFTFRGRIYNNASDIDVGFASTRQRGCPSLTTTANNQKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVSEYSKNPTSFKSDFAAAMIKMGDIKPLTGSDGVIRRICSAIN*	317

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal4g1834	316	PANTHER	PEROXIDASE 72-RELATED	5	315	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Mal4g1834	316	Gene3D	-	23	316	-	-
	Mal4g1834	316	ProSiteProfiles	Plant heme peroxidase family profile.	19	316	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mal4g1834	316	CDD	secretory_peroxidase	19	315	IPR033905	GO:0004601\|GO:0042744
	Mal4g1834	316	ProSitePatterns	Peroxidases proximal heme-ligand signature.	179	189	IPR019793	-
	Mal4g1834	316	Gene3D	Peroxidase, domain 2	157	295	-	-
	Mal4g1834	316	ProSitePatterns	Peroxidases active site signature.	51	62	IPR019794	GO:0004601
	Mal4g1834	316	Pfam	Peroxidase	37	280	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mal4g1834	316	PRINTS	Haem peroxidase superfamily signature	51	65	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mal4g1834	316	PRINTS	Haem peroxidase superfamily signature	131	143	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

Showing 1 to 10 of 24 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal4g1834	Mal-Chr4	34658631	34660297	Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal4g1834	4	316	Peroxidase	AT1G14550	69.085	1.44e-161	451

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal4g1834	K00430		-	gmx:100786161	536.569

Showing 1 to 1 of 1 entries