Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1830 ATGACCTGTTTCCCTTGCTTATTTAGTAAGACATCGTCTTCTTCAAGACAAAATCTAGACAATGATGAAGATATTTCAGGCATTCATAATGTTAAAATCTATACCTACAAAGAACTAAGGAATGCCACTGATAACTTTAGTCCTGCCAATAAAATTGGAGAGGGTGGTTTTGGTTCTGTCTACAAGGGACAACTAAAAAATGGAAAACTTGCTGCTATAAAAGTTCTTTCAGCTGAATCAAAACAAGGTGTGAAGGAGTTCTTGACAGAGATTAATGTGATCTCCGAAATAGAGCATGAAAATTTGGTTAAGTTATATGGTTGTTGTGTTGAAAGAAATAGCAGGATTTTAGTCTACAATTACCTTGAGAATAATAGCCTTTTACAAACTCTTCTAGGTGGAGGTCACAGTAGTATCTACTTTGATTGGCGAACGCGATGTAGAATATGTGTTGGCATTGCACGCGGGCTTGCCTTTCTACACGAAGAAGTTAGGCCCCCTATCATTCATAGGGATATAAAAGCAAGTAATATTCTCCTTGACAAAGACCTGACACCCAAGATTTCCGATTTTGGTCTTGCAAAGCTTATGCCAGCAAACGCGACTCATGTCAGTACACGTGTAGCAGGAACAGTAGGTTATTTGGCACCGGAGTATGCAATAGGGGGAAGGCTTACGCGAAAAGCAGACATTTACAGTTTCGGTGTCCTCCGTGTAGAGATAGTCAGTGGAAGACGTAATACAAATTCGCGACTGCCAATAGAAGAACAATTCATTCTAGAGAGGACATGGGAACTTTACGAGCGAAAGGAATTAGTTGGACTAATAGATACATCACTAAACGGGGATTTCGATGCCGAGCAGGCCTGCAAGTTTCTAAAGATTGGCCTTCTTTGCACTCAGGAATCTCCAAAGCGCCGGCCATCCATGTCTTCTGTGGTCAAGATGCTTATCGGAGAAATGGAAGTCGACGATAGTATGATGACAAAACCTGCCTTAATTTGTGATTTTATGGACCTCAAAGTTAGACATAAACAAGAAAGTATAATTGATATGAAGACTTCATCTTCAAGTAATACATCCTCTGCCTCAGAGCATGTAGACACTACCATTACATCAGCTGCAACTACAACCTTCACTACACAATATGATCACAGCATGTAA 1164 0.4012 MTCFPCLFSKTSSSSRQNLDNDEDISGIHNVKIYTYKELRNATDNFSPANKIGEGGFGSVYKGQLKNGKLAAIKVLSAESKQGVKEFLTEINVISEIEHENLVKLYGCCVERNSRILVYNYLENNSLLQTLLGGGHSSIYFDWRTRCRICVGIARGLAFLHEEVRPPIIHRDIKASNILLDKDLTPKISDFGLAKLMPANATHVSTRVAGTVGYLAPEYAIGGRLTRKADIYSFGVLRVEIVSGRRNTNSRLPIEEQFILERTWELYERKELVGLIDTSLNGDFDAEQACKFLKIGLLCTQESPKRRPSMSSVVKMLIGEMEVDDSMMTKPALICDFMDLKVRHKQESIIDMKTSSSSNTSSASEHVDTTITSAATTTFTTQYDHSM* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1830 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Mal4g1830 387 Pfam Protein kinase domain 49 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1830 387 SUPERFAMILY Protein kinase-like (PK-like) 23 317 IPR011009 -
Mal4g1830 387 Gene3D Transferase(Phosphotransferase) domain 1 122 332 - -
Mal4g1830 387 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 377 - -
Mal4g1830 387 ProSiteProfiles Protein kinase domain profile. 46 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1830 387 Gene3D Phosphorylase Kinase; domain 1 16 121 - -
Mal4g1830 387 PANTHER - 2 377 - -
Mal4g1830 387 CDD STKc_IRAK 52 317 - -
Mal4g1830 387 SMART serkin_6 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1830 387 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1830 Mal-Chr4 34607222 34609278 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1830 17 332 Receptor kinase-like Gene Family AT1G53430 52.681 3.02e-109 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g1830 Pkinase 3.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1830 - - gmx:100782320 615.535