Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1827 ATGACTTGTTTCCCTTTCTCATTCAGTAAGACACTGTCTTCTGCAAGACAAAATCCAGACAACGATGAAGATATTTCAGGCATTCATAATGTTAAAATCTATACCTACAAAGAACTAAGGAATGCCACTGATGACTTTAGTCCTGCCAATAAAATTGGAGAAGGTGGTTTTGGTTCTGTCTACAAGGGTCGACTTAAAAATGGAAAACTCGCTGCTATAAAAGTTCTTTCAGCTGAATCTAAACAAGGGGTGAAGGAGTTCTTGACAGAGATTAATGTGATCTCCGAAATAGAGCATGAAAATTTGGTCAAGTTATATGGTTGTTGTGTTGAAAAAAATAGCAGGATATTAGTCTACAATTACCTTGAGAATAACAGTCTTTCACAAACACTTCTAGGCGGAGGTCACAGTAGTGCTAGTATCTACTTTGATTGGCGAACGCGGTGTAGAATATGCATTGGCGTTGCACGTGGGCTTGCCTTTCTTCATGAAGAAGTCAGGCCTCCTATCATTCATAGGGATATAAAAGCAAGCAATATTCTCCTTGACAAAGACCTTACACCGAAGATTTCTGATTTCGGTCTTGCAAAGCTTATTCCAGCAAACGCGACTCATGTCAGCACACGTGTAGCAGGAACGCTAGGTTATTTGGCACCGGAGTATGCAATAGGGGGAAGGCTTACACGAAAGGCAGACATTTACAGTTTTGGTGTTCTCCTTGTGGAGATAGTCAGCGGCAGATGTAACACAAATTCACGGCTACCAATAGAAGAGCAATTCATTCTAGAGAGGACATGGGATCTTTACGAGCGAAAGGAATTAGTTGGACTGATAGATACATCGCTAAACGGGGAATTTGATGTCGAGCAGGCGTGTAAATTTCTGAAGATTGGCCTTCTTTGCACTCAGGAATCTCCTAAGAACCGACCGTCCATGTCTACTGTGGTCAAGATGCTTACCGGAGAAATGAAAGTTGATGACAGTATGATGACAAAACCTGCCTTAATTTCTGATTTTATGGACCTCAAAGTTAGACATAAACAAGAGAGTATAATTGATATGAAGACTACATCTTCATATAATACATCCTCGGCCTCGGAGCAACAGGACACTACCATTATATCAGCTGCAACTTCAACCTTCACTGCACAATATGATCACAGCATGTAA 1170 0.4085 MTCFPFSFSKTLSSARQNPDNDEDISGIHNVKIYTYKELRNATDDFSPANKIGEGGFGSVYKGRLKNGKLAAIKVLSAESKQGVKEFLTEINVISEIEHENLVKLYGCCVEKNSRILVYNYLENNSLSQTLLGGGHSSASIYFDWRTRCRICIGVARGLAFLHEEVRPPIIHRDIKASNILLDKDLTPKISDFGLAKLIPANATHVSTRVAGTLGYLAPEYAIGGRLTRKADIYSFGVLLVEIVSGRCNTNSRLPIEEQFILERTWDLYERKELVGLIDTSLNGEFDVEQACKFLKIGLLCTQESPKNRPSMSTVVKMLTGEMKVDDSMMTKPALISDFMDLKVRHKQESIIDMKTTSSYNTSSASEQQDTTIISAATSTFTAQYDHSM* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1827 389 PANTHER - 2 378 - -
Mal4g1827 389 SMART serkin_6 46 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1827 389 Gene3D Phosphorylase Kinase; domain 1 16 121 - -
Mal4g1827 389 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 378 - -
Mal4g1827 389 CDD STKc_IRAK 52 321 - -
Mal4g1827 389 ProSiteProfiles Protein kinase domain profile. 46 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1827 389 Pfam Protein kinase domain 49 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1827 389 SUPERFAMILY Protein kinase-like (PK-like) 23 319 IPR011009 -
Mal4g1827 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Mal4g1827 389 Gene3D Transferase(Phosphotransferase) domain 1 122 339 - -
Mal4g1827 389 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1827 Mal-Chr4 34581424 34584210 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1827 16 338 Receptor kinase-like Gene Family AT1G56120 52.615 4.09e-109 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g1827 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1827 - - gmx:100782320 632.869