Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1817 ATGGCTCAGCTCTCACCGGAAACCCTAGCAAAGATAAAATCATACCGCCTTTCCCCATCCGCGTTCCCCACTGAAATTTGTGCGAAATTGATGCTTCAATTTTTTGAACAATATCGTGATCTCAGCAATGGCAGCGTACCACCGGAGAACCATATCAACCAAAACTTGAATACAATTGCTCAACTCCAACAAGTCCAACTCAGACAGCGGACAATGCTCGTTTCACAAAATAATAATTTGCGTGTTAATGGTTATATACAACAACAACCACAATCAAACCTTATCCCACAAAGTGGGGTCGAACAAAATTATGGAAAAAAAAGAAAGAATGAAGTTGAAGTAACAGGTTCACCGAGTGCACCTGTTTCACTACTTGGTAATTCTATCAATGGTCAGTTATGGGGATCAACCAATACTACAAACAAATGTTTGGATACCCTGCGTGGTCCTGATGGTAAACTTCCTGAGAAGTTGAGGAATATATCACCTCAGCACATTCAACATGTCAGTAACGAGATTATGGATAAAAATCCCGATGTCCACTGGGATGACATAGCTGGATTGACCCATGCCAAAAAATGTGTCAATGAGATGGCCGTGTTACCTCTGCGACGTCCTGACTTATTTATGGGTTGTCGTTCTCCTGGGAGAGGTCTGCTTTTATTTGGTCCACCAGGAACTGGTAAAACAATGATTGGCAAAGCCATAGCTGGGGAGGCAAAGGCAACCTTCTTTTACATATCTGCAAGCTCGTTGACTAGCAAATGGGTTGGTGAAGGTGAAAAGCTAGTAAGAGCCCTCTTTGGAGTAGCTAGTAGTCATCAGCCAGCAGTAATATTTGTTGATGAAATAGATTCACTCTTGTCTAAGCGTAAATCAGATACTACTCAGCATGAAGCATATAGACTTTTAAAGACACAATTTTTTATTGAAATGGAAGGCTTTGCCAGTGGTAACGAGCAAGTCCTGCTTGTTGGCGCAACAAATCGTCCCCAAGATCTTGATGAAGCGGCACGAAGGAGACTTTCTAAACGACTATACATTCCCCTACCATCCTCAGAGGCAAGAGCATCGATTGTACGTCGTCTTTTAGAGAAGGATGGATTATTCAAGCTATCAGATGAGGAAATGGATATTATATGCAGCTTAACTGATGGTTATTCAGGATCAGACATGAAAAACTTAGTGAAGGATGCTTCTCTGGGTCCCATAAGAGAGGCATTGGAACTAGGTCTAGATATTATGGAGTTGAAAAAGGAGGATATGAGGCTAGTAACTCTTCAGGACTTCAAGAATTCTCTGCAAGAGATAAGGCCTTCTGTTTCACCTAATGAACTTGGCGCTTATGAGCAATGGAACAAGCAATTTGGTAGCTTACCAATTTAG 1386 0.417 MAQLSPETLAKIKSYRLSPSAFPTEICAKLMLQFFEQYRDLSNGSVPPENHINQNLNTIAQLQQVQLRQRTMLVSQNNNLRVNGYIQQQPQSNLIPQSGVEQNYGKKRKNEVEVTGSPSAPVSLLGNSINGQLWGSTNTTNKCLDTLRGPDGKLPEKLRNISPQHIQHVSNEIMDKNPDVHWDDIAGLTHAKKCVNEMAVLPLRRPDLFMGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWVGEGEKLVRALFGVASSHQPAVIFVDEIDSLLSKRKSDTTQHEAYRLLKTQFFIEMEGFASGNEQVLLVGATNRPQDLDEAARRRLSKRLYIPLPSSEARASIVRRLLEKDGLFKLSDEEMDIICSLTDGYSGSDMKNLVKDASLGPIREALELGLDIMELKKEDMRLVTLQDFKNSLQEIRPSVSPNELGAYEQWNKQFGSLPI* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1817 461 Gene3D - 178 453 IPR027417 -
Mal4g1817 461 PANTHER FIDGETIN-LIKE PROTEIN 1 89 459 - -
Mal4g1817 461 Pfam Vps4 C terminal oligomerisation domain 423 457 IPR015415 -
Mal4g1817 461 ProSitePatterns AAA-protein family signature. 322 341 IPR003960 GO:0005524|GO:0016887
Mal4g1817 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 456 IPR027417 -
Mal4g1817 461 CDD AAA 212 350 - -
Mal4g1817 461 Gene3D - 351 437 - -
Mal4g1817 461 PANTHER AAA DOMAIN-CONTAINING 89 459 - -
Mal4g1817 461 SMART AAA_5 215 352 IPR003593 -
Mal4g1817 461 Pfam ATPase family associated with various cellular activities (AAA) 219 350 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1817 Mal-Chr4 34186839 34190589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1817 172 459 Calmodulin-binding Proteins AT3G56690 32.192 2.87e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1817 K22766 - gmx:100789161 520.005