Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1805 ATGGCAGATCCAAGCTCCATTTCCTTGAAATTCTATATATTACTAGTTGCAATACTTGCATCTGAGTCTAGTGGCATCTCTATTGATCCTAGGGTAACGGTTCATATTAGGAACGATATAAAGCCCCATCCCACACATCTCACTGTTCATTGCAAGTCCAAAGATGATGATCTTGGATTTCACAAAATTAAATTTGGAGAATTTTATAGGTTTTCATTTAGGCCAATAGTTTTTCCAAGTTTTCAAAATACATTATTCTTCTGTAGCTTTAGATGGCAAGGAAGCCGCTACCGTCATTATCTTGACATTTACGATGAAAAGTTTGATAACTGCAAAGATTGCTATTGGAAGATAAATAAAATTGGTGGGTGTAGGTATTTTCTTGGCGCTCCTGGGTCTGATGTATGCGTCACTTGGAAAAGCATTGAATTAATGGATGAAAACCGTCCATTTCCATCTCCATATCCATCTCCATCCCCATCTCCATCTTAG 492 0.376 MADPSSISLKFYILLVAILASESSGISIDPRVTVHIRNDIKPHPTHLTVHCKSKDDDLGFHKIKFGEFYRFSFRPIVFPSFQNTLFFCSFRWQGSRYRHYLDIYDEKFDNCKDCYWKINKIGGCRYFLGAPGSDVCVTWKSIELMDENRPFPSPYPSPSPSPS* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1805 163 PANTHER - 8 139 IPR010264 -
Mal4g1805 163 Pfam Plant self-incompatibility protein S1 33 139 IPR010264 -
Mal4g1805 163 PANTHER S-PROTEIN HOMOLOG 18-RELATED 8 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1805 Mal-Chr4 33908186 33908677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1805 29 144 Carbohydrate Esterase AT3G16970 40.984 2.04e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1805 - - mtr:MTR_7g018330 178.333