Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1730 ATGAGTTTTATGAATTACATCGCACAATGGAGAAGCGTTGCGAAAGAAGCCTTAGATCGCACAGCAATAATCACAAAATTCCTCTGTTACCTTCACTTCACCAGCAACTATCTCTGTTCACCAACACACGCGTATGGACCTAGTATGCTCCCAACCCTAAATATAGCTGGTGATGTTGTTCTGGCGGAGCATGTTTCTCCGAGGATTGGGAAAGTTGGGTATGGTGATTTGGTTCTTGTTAGGTCTCCTTTGAATCCTAATAGGAATTTGACGAAACGGGTTGTTGCTATGGAAGGGGATACTGTTACTTATTTTCATCCTTTGAATTCCGAGGATTCTCGTATTGTTGTGGTGCCGAAGGGGCATGTTTGGATTCAAGGAGATAACGTCTATGCTTCCCGTGATTCACGTCATTTTGGTCCTGTTCCATATGGTCTTATAAGAGGAAAAGTGTTTTTCCGGGTTTGGCCACCCAGTAGCTTTGGACGCTTAGATAATTGA 501 0.4331 MSFMNYIAQWRSVAKEALDRTAIITKFLCYLHFTSNYLCSPTHAYGPSMLPTLNIAGDVVLAEHVSPRIGKVGYGDLVLVRSPLNPNRNLTKRVVAMEGDTVTYFHPLNSEDSRIVVVPKGHVWIQGDNVYASRDSRHFGPVPYGLIRGKVFFRVWPPSSFGRLDN* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1730 166 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 5 164 - -
Mal4g1730 166 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 5 164 - -
Mal4g1730 166 ProSitePatterns Signal peptidases I signature 3. 123 136 IPR019758 GO:0004252|GO:0016021
Mal4g1730 166 Gene3D Umud Fragment, subunit A 35 163 - -
Mal4g1730 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal4g1730 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal4g1730 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal4g1730 166 CDD S26_SPase_I 46 151 IPR019533 GO:0004252|GO:0006465
Mal4g1730 166 SUPERFAMILY LexA/Signal peptidase 37 164 IPR036286 -
Mal4g1730 166 Pfam Signal peptidase, peptidase S26 26 104 IPR019533 GO:0004252|GO:0006465
Mal4g1730 166 Pfam Signal peptidase, peptidase S26 108 156 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1730 Mal-Chr4 30762821 30766529 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1730 49 164 MADS-box Gene Family AT1G29960 52.137 1.22e-38 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1730 K09647 - csin:114274489 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1730 4 30762821 30766529 Mal4g1730 4 30762821 30766529 ECH