Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1726 ATGATGAAATCCCTGGTTATAGCTGTTTCCATAACCATATGCTTCATTGCTTTTGTCATCTCTAAGATTTTTATCTCAATCCTCCTCTACAAAAGATGGAGAAGAAAGCATATGATTTATGAAGAAGGTTATACAGGAGGGAAGATGGTGATATTTAGGTCTTCAATCCTTAAATCTTTAACTACTGATATGGTGTTAAAGAAGACACAGAAACTGAACAACAAAGACATCATTGGTTCTGGTGGTTATGGTGTAGTTTATGAACTGAAACTGGACGATTCCGCGGCCTTTGCGGTGAAAAGGTTGAACCGCGGAAGTGCCGAGAGAGATAAAGGTTTCGAGAGAGAGTTGCAAGCAATGGCAGACATAAAACACCGCAATGTTGTGACTCTTCATGGATATTACACTGCCCCACACTACAATCTTCTCATATATGAGTTAATGCCTAATGGAAGTTTGGATTCCCTGTTGCATGGAAGATCAATGAACAAGAAGGTTTTGGATTGGCCAACCAGACACAGAATAGCTGTAGGTGCAGCTAGAGGAATATCATATCTTCACCATGATTGTATCCCTCACATCATCCACAGAGACATCAAGTCAAGCAATATATTGTTGGATCAAAATTTGGAAGCCCAAGTTTCCGATTTCGGATTAGCCACGTTGATGGAACCAAACAAAACTCATGTTTCAACAATTGTTGCTGGAACTTTTGGATACTTGGCTCCGGAATATTTTGATACAGGAAGAGCAACAGTCAAAGGGGATGTTTACAGTTTTGGAGTTGTGTTACTGGAGCTTTTAACGGGAAAGAAACCTAGTGATGAAGCATTCATGGAAGAGGGAACCAAGCTTGTCACATGGGTGAAAGCTGTTATTCAAGAGAAGAAGGAGGAATCAGTTCTTGATAGTAGCTTAGGGTCATGTCCGATGCATGAGGTCAACAAGGTGTTTAACATTGCAATGATGTGTCTTGAACCAGACCCTTTGAACAGACCAACCATGGCTGAGGTTGTCAACTTGCTCGAGAAAACACAAACAGATAGACTTGTTACACCATCCTGA 1065 0.4075 MMKSLVIAVSITICFIAFVISKIFISILLYKRWRRKHMIYEEGYTGGKMVIFRSSILKSLTTDMVLKKTQKLNNKDIIGSGGYGVVYELKLDDSAAFAVKRLNRGSAERDKGFERELQAMADIKHRNVVTLHGYYTAPHYNLLIYELMPNGSLDSLLHGRSMNKKVLDWPTRHRIAVGAARGISYLHHDCIPHIIHRDIKSSNILLDQNLEAQVSDFGLATLMEPNKTHVSTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPSDEAFMEEGTKLVTWVKAVIQEKKEESVLDSSLGSCPMHEVNKVFNIAMMCLEPDPLNRPTMAEVVNLLEKTQTDRLVTPS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1726 354 Gene3D Phosphorylase Kinase; domain 1 48 147 - -
Mal4g1726 354 PANTHER BNAA07G39120D PROTEIN 1 347 - -
Mal4g1726 354 Pfam Protein kinase domain 74 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1726 354 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 347 - -
Mal4g1726 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Mal4g1726 354 SUPERFAMILY Protein kinase-like (PK-like) 53 344 IPR011009 -
Mal4g1726 354 SMART serkin_6 72 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1726 354 ProSiteProfiles Protein kinase domain profile. 72 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1726 354 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Mal4g1726 354 Gene3D Transferase(Phosphotransferase) domain 1 148 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1726 Mal-Chr4 30719873 30722517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1726 3 343 Receptor kinase-like Gene Family AT2G35620 46.802 1.25e-102 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Mal4g1726 Pkinase 5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1726 - - ahf:112703495 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1726 4 30719873 30722517 Mal4g1726 4 30719873 30722517 ECH