Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1682 ATGGTGGGGTTCCAGAGCGATCATATGCCTGGAAACAAGTATAATGGTAATTACAATTCTCCAGGTCGTGTTGAACGACTTGTGAGAGGAAGAGAACAAAGAAAAAGTAGCAAGGCATCACCTCATTTGATTGAACCACCTGATAGTGTTCTTATTAATAACAATATTAATAGCAATAATAATCATAATGTTATTAATAATAATAGTATTAATGATAAACATGTGGTTACTGAATCTTTTGAGCATGACCAATGCTTAAAAGAATGTAATAACTCTGGTGCTTCTCATGTTGAACGATACCTGGAAGGTGCTGCAGTAGCAGCAAAGGCTCTTAGTAATGGATATGTAAGGGAAGATGGAAAACCTGTTAGACAACGGCTTTTGGTTGTTGCGAATAGATTGCCAGTTTCAGCTGTTAGGAAAGGTGAGGATTCTTGGTCTCTGGAGATCAGTGCTGGTGGCTTGGTCAGCGCTCTTTTAGGTGTGAAGGATTTTGAAGCGAGGTGGATAGGTTGGGCCGGTGTCAATGTGGCGGATGAGGTTGGACAGAAGACACTCACTGAAGCATTGGCTGAAAAGAGGTGTATCCCAGTATTTCTTACTGAAGAGATTGTTCATCAGTACTATAATGGCTATTGCAATAACATTTTGTGGCCCCTTTTTCATTACCTTGGACTTCCGCAAGAAGATCGTCTAGCGACAACGCGTGGTTTCCAGTCTCAATTTGAATCGTATCAGAAGGCAAATCAAATGTTTGCTGATGTCGTAAATCAGGTCTATGAAGAGGGAGATATCGTTTGGTGTCATGATTATCATCTAATGTTCCTACCTCAGTGCTTAAAGAAATTTAACAGCAAAATGAAAGTTGGCTGGTTTCTCCATACCCCATTTCCATCTTCTGAAATTCATAGGACACTGCCATCTCGTTCAGAACTCCTGCGTGCAGTTCTTGCTGCTGATTTGGTTGGTTTCCACACATATGATTATGCACGACACTTTGTTAGTGCGTGTACTCGCATTCTTGGATTTGAGGCCACACCGGAGGGGGTTGAGGATCAAGGGAAACTGACTCGAGTTACTGCATTTCCAATTGGTATAGACTCAGATCGATTCATACGTGCACTTGACCATCCTAAGGTCGAAGGTCCCTTCAAAGACTTGGTAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATTCCTCAAAAACTTCTAGCTTTTGAAAAATTCTTGGAAGATAATGCGGACTGGCGAGATAAGGTCGTTCTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCCGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATCAATGGAAGATTTGGATCACTGACTGCTGTTCCTATACATCACCTGGACCGCACTCTTGACTTTCATGCGCTATGTGCTTTGTACGCTGTTACAGATGTTGCGCTTGTCACTTCTTTGAGGGATGGAATGAATCTCGTCAGTTACGAGTTCGTTGCCTGCCAAGAAAAAAAAAAGGGAGTTCTCATCCTTAGTGAATTTGCTGGTGCTGCGCAGTCTCTTGGTGCTGGGGCACTTCTGGTCAACCCCTGGAACATCACAGAAGTTGCTCAAGAAATTGCCAAAGCTCTGAACATGCCATCTGAAGAGAGAGAGAAGCGACATAGGCACAACTTCCATCATGTAACAACTCACACTGCGCAGGAATGGGCAGAAACGTTTGTTAGCGAGCTAAATGATACTGTTGTTGAGGCTCAGCTAAGGACAAAACAAGTTCCACCACGACTCCCAACCAGGAATGCAATTCAACAATATCTGAAGTCAACTAATCGATTGCTTATTTTGGGGTTTAATGGAACTTTAACTGAGCAAGTTGAGAGAAAAGGTGATCAATTGAAAGAAATGGAACTCTCAGTGCATCCAGAATTGAAACAACCATTGACACAACTTTGCAGTGATCCAAATACTACAGTTGTCGTGCTCAGTGGAAGTGGTAGAGAACTTCTAGATGAAAACTTCAGAGAATATAATACTTGGCTAGCAGCAGAGAATGGGATGTTTTTAAACCCTTCAAATGGAGAATGGATGACTACAATGCCAGAACAACTGAATATGGAATGGGTTGACAGCGTAAAGCATATTTTTGAATACTTCACTGAAAGAACTCCTCGATCGCATTTTGAAGAAAGGGAAGCTTCCCTTGTATGGAATTACAGACATGCAGATGTTGAGTTTGGTAAACTTCAAGCAAGGGACATGCTCCAACATCTCTGCTCGGGTCCAATTTCAAATGCATCGGTTGAAGTTGTTCAAGGGAGCCGATCAGTTGAGGTGCGAGCTGCTGGTGTTACAAAGGGAGCAGCCATTGACCGCATCCTGGGGGAGATAGTTCACAGTAAATCAATGACAACACCAATTGATTATGTTTTGTGTATAGGACATTTTCTAGCAAAGGATGAAGATATTTACGACTTTTTCGAGCCAGAGCCTTCTTGTTTTGGCGCGGGTCTTCAACGAAGCAAGCTAACAGATGCAAGCAAGTTTTCTAATGAGAAGGTATCGCCTATGAAGAGCCCATCAATCAAAAACGGATTCAAGTCAACAAATCAAAGCAAGGGACAACGACCTATCTCAAATTCGGAGAAGAAAACAAATAACCATGTCAGCCGCACAGCGCGGAAGCCAGCTCCCGAAAAGATCTCTTGGAATGTCCTTGACCTGAAGAAGGAAAATTACTTCTCATGTGCTGTTGGGAGAACTCAAACAAATGCTGGATATACACTTCCAACGTCTGATGAGGTTGCTGAATTTCTGAAGAAACTTGCACATGCATCTCCTCGTAATAACTGA 2886 0.4224 MVGFQSDHMPGNKYNGNYNSPGRVERLVRGREQRKSSKASPHLIEPPDSVLINNNINSNNNHNVINNNSINDKHVVTESFEHDQCLKECNNSGASHVERYLEGAAVAAKALSNGYVREDGKPVRQRLLVVANRLPVSAVRKGEDSWSLEISAGGLVSALLGVKDFEARWIGWAGVNVADEVGQKTLTEALAEKRCIPVFLTEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRGFQSQFESYQKANQMFADVVNQVYEEGDIVWCHDYHLMFLPQCLKKFNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGFEATPEGVEDQGKLTRVTAFPIGIDSDRFIRALDHPKVEGPFKDLVERFKGRKVMLGVDRLDMIKGIPQKLLAFEKFLEDNADWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRTLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGALLVNPWNITEVAQEIAKALNMPSEEREKRHRHNFHHVTTHTAQEWAETFVSELNDTVVEAQLRTKQVPPRLPTRNAIQQYLKSTNRLLILGFNGTLTEQVERKGDQLKEMELSVHPELKQPLTQLCSDPNTTVVVLSGSGRELLDENFREYNTWLAAENGMFLNPSNGEWMTTMPEQLNMEWVDSVKHIFEYFTERTPRSHFEEREASLVWNYRHADVEFGKLQARDMLQHLCSGPISNASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLAKDEDIYDFFEPEPSCFGAGLQRSKLTDASKFSNEKVSPMKSPSIKNGFKSTNQSKGQRPISNSEKKTNNHVSRTARKPAPEKISWNVLDLKKENYFSCAVGRTQTNAGYTLPTSDEVAEFLKKLAHASPRNN* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1682 961 CDD HAD_TPP 624 841 - -
Mal4g1682 961 Gene3D Glycogen Phosphorylase B; 373 575 - -
Mal4g1682 961 MobiDBLite consensus disorder prediction 1 47 - -
Mal4g1682 961 Gene3D - 626 807 IPR023214 -
Mal4g1682 961 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 126 591 IPR012766 GO:0003825|GO:0005992
Mal4g1682 961 Pfam Trehalose-phosphatase 629 865 IPR003337 GO:0003824|GO:0005992
Mal4g1682 961 SUPERFAMILY HAD-like 623 954 IPR036412 -
Mal4g1682 961 TIGRFAM T6PP: trehalose-phosphatase 622 838 IPR003337 GO:0003824|GO:0005992
Mal4g1682 961 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 125 594 - -
Mal4g1682 961 MobiDBLite consensus disorder prediction 860 907 - -
Mal4g1682 961 Pfam Glycosyltransferase family 20 126 591 IPR001830 GO:0003824|GO:0005992
Mal4g1682 961 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 55 954 IPR001830 GO:0003824|GO:0005992
Mal4g1682 961 Gene3D Glycogen Phosphorylase B; 118 372 - -
Mal4g1682 961 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 55 954 - -
Mal4g1682 961 MobiDBLite consensus disorder prediction 860 897 - -
Mal4g1682 961 MobiDBLite consensus disorder prediction 25 41 - -
Mal4g1682 961 CDD GT20_TPS 126 591 IPR001830 GO:0003824|GO:0005992
Mal4g1682 961 Gene3D - 713 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1682 Mal-Chr4 29402274 29411080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1682 9 954 Trehalose Biosynthesis Gene Families AT1G78580 73.237 0.0 1407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1682 K16055 - gmx:100789554 1522.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1682 4 29402274 29411080 Mal4g1682 4 29402274 29411080 ECH