Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1677 ATGAAGATTCAGTGTAATGTTTGTGAAGGTGCAGAGGCTAAGGTTTTGTGTTGTGCTGATGAAGCAGCTTTGTGTTGGGAATGTGATGAGAAAGTTCATGCTGCTAATAAACTTGCTAGCAAGCATCAGAGAGTTCCTCTTTCTGCTTCTTCTTCTCATATGCCTAAATGTGATATTTGTCAGGAAGCATTCGGCTATTTCTTTTGTCTAGAGGATCGCGCTTTACTCTGTCGAAAATGTGATTTAGCAATACACACTGCAAATGCATATGTCTCAGGACATCAAAGGTTTCTTCTCACCGGTGTAAAAGTCGGCCTAGAAGCTGCTACTGATCCCGGCACTTCCTCAAATTCTTTGAAGACAGATTCTGGTGAGAAAGTTTCCGATACAAAATCTTCTTCTGTCTCGAGAAAGGTTTCGCAAATGCCTCAATCATCTGAATACAATGAAATGTTGCCAACCGAAACCGGAGGATTTGGAGAGTTTCCACCAGCCAAGGTGTCTTATGGTGGTGGTTCTAACTCTGGAAACATGTCACAGTGGTCAATTGATGAATTTTTCAGTGTAAACGACTTCAGTCAGAATTATAACTACATGGATGGATCATCAAATTCAAGGGCTGACAGTGGTAAACTTGAGGATTCTGATTCTCCTATTTTAAGATCCAATGAAGAGGAAATGGAGTACGACGACTACATGGACCGCGTTCCAGATTCATCTTGGACAGTTCCTCAGATCCCTTCACCACCTACAGCTTCTGGACTAAACTGGCCGAAAAACCCTCGGTATTCATCCGATAATGCTCTATTTGTTCCCGACGTAGGCTTTTCTAGCATGCAACACCCTCAGAATAGTAGTAATTTTTCAAGACCGCGGAATCATCATTAA 888 0.42 MKIQCNVCEGAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSASSSHMPKCDICQEAFGYFFCLEDRALLCRKCDLAIHTANAYVSGHQRFLLTGVKVGLEAATDPGTSSNSLKTDSGEKVSDTKSSSVSRKVSQMPQSSEYNEMLPTETGGFGEFPPAKVSYGGGSNSGNMSQWSIDEFFSVNDFSQNYNYMDGSSNSRADSGKLEDSDSPILRSNEEEMEYDDYMDRVPDSSWTVPQIPSPPTASGLNWPKNPRYSSDNALFVPDVGFSSMQHPQNSSNFSRPRNHH* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1677 295 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 284 - -
Mal4g1677 295 CDD Bbox1_BBX-like 5 47 - -
Mal4g1677 295 MobiDBLite consensus disorder prediction 277 295 - -
Mal4g1677 295 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 284 - -
Mal4g1677 295 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mal4g1677 295 MobiDBLite consensus disorder prediction 207 228 - -
Mal4g1677 295 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Mal4g1677 295 MobiDBLite consensus disorder prediction 241 263 - -
Mal4g1677 295 MobiDBLite consensus disorder prediction 200 295 - -
Mal4g1677 295 Pfam B-box zinc finger 4 47 IPR000315 GO:0008270
Mal4g1677 295 Pfam B-box zinc finger 54 95 IPR000315 GO:0008270
Mal4g1677 295 Gene3D Classic Zinc Finger 1 92 - -
Mal4g1677 295 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mal4g1677 295 SMART bboxneu5 52 99 IPR000315 GO:0008270
Mal4g1677 295 MobiDBLite consensus disorder prediction 110 146 - -
Mal4g1677 295 CDD Bbox1_BBX-like 56 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1677 Mal-Chr4 29157285 29159973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1677 1 278 C2C2-CO-like Transcription Factor Family AT1G78600 47.910 3.24e-90 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mal4g1677 zf-B_box 1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1677 - - gmx:100790959 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1677 4 29157285 29159973 Mal4g1677 4 29157285 29159973 ECH