Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1638 ATGTTTTTTCTCATGTCAAGCTTCAAACATGTATCTATGTTCTTCTTTTTGTTCTTGGCTTTCAATTGTTTCTCAATGTTTGGATCCAACGCTCAACTATTACCACAAGATGAAGTGAAATTGCTACAAACAATATCAGACAAGGTAAGTAAGTTGAATTGGAAGGTTACACAACGTTCCTGCAACGTGGAGGATAAAGGATTTGGTAACGAGAATATCTTTAAGGATCAAATTACAAGGAATGTAACATGTGATTGCACTTTCAACTCTAGCACTGTTTGTCATGTGACAATGATCTTGCTCAAGGGTCTCAACATATCTGGAGTTTTGCCAAATGAATTTGGAAATCTCACTCATCTCAAAGTACTTGATCTTACTCGGAATTATCTAAATGGCTCAATTCCAAGGAGTTTTGGACGCCTCTCATCACTAGTGAGACTGTCTGTTTTGGGAAATCGACTTAGCGGTCCAATTCCCTCAGAAATTGGTGATATTTCCACTCTGCAAGAAGAACTAAACTTTGAGGATAATCTTCTTGAAGGGCCTCTTCCTCCCAGCCTTGGAAACTTGAGAAACTTGCAGAAATTAATGCTTTCTGCAAATAATTTTACAGGGACAATACCAGAAGCATATGGCAATCTAAAGAATCTCACAAATTTTCGGATAGATGGAAGCAGTTTATCTGGAAAGATCCCTAGTTTCATTGGAAACTGGACCAAACTTGAAAGATTGGATTTGCAAGGCACATCCTTGGAAGGTCCAATTCCTCCTGCTGTATCTTTGTTGAAAAATTTGAAGGAATTGAGAATATCTGATTTGAAGGGACAAACGACCATGACATTTCCCGATCTTAAGGATTTGAAACGCTTGATGAGACTGGAATTGAGAAATTGCTTAATCACTGGTCCTATTCCAGACTACATTGTTGAACTGGAAAATTTAAAAACTATAGATTTAAGCTCCAACAGATTGACTGGTCCAATTCCAGATTCACTTCAGGACTTGGAATCAATCAATTTCGTGTTTCTGACAAATAATTCTCTGAGTGGAACAATTCCCGGATGGATACTGAGCAACAAACAGAACTTTGATTTATCTTTCAACAATTTTACCGAGGCTTCTGCATCTGATTGCCAGCTCTTGGATGTGAACTTAGCTTCCAGCATCTCTCCTTCATCAAACACTTCATTGTCTTGTCTGACGGTGGACTTACCTTGTTCGGGAAAACCTCGGTATCATTCGCTGTTCATAAATTGTGGAGGACCTGCAACCGAGTTTGATGACTATGAATATGAAGCCGATGAACATCTACGTGGAATTTCAAACTTTGTTCCAAGTAGTGATGGAAAATGGGCTTATAGTAGCACAGGAGTATTTCTAGGAAATGAAAAAGCTGATTATGTGGCAAGAAATGTGTTCTCTTTGAATATTAATGGCTCTGATTACTACCAAACAGCCCGCATTGCGCCGATATCTCTTAAATACTTTGGATTTTGTATGCTGAAGGGAAATTATAATGTGAAACTTCATTTTGCTGAGATCATGTTTTCTAATGATCAGACATTCAGCAGCACTGGAAGGCGCATATTCGATGTTTCAATTCAAGGTCATAAATATTTGAAAGATTTTAACATTATGGAAGCAGCTGGTGAAGTTGGCAAGGGAATCATTAGGGAGTATAATGTTGATGTTAATGATAGCACTTTGGAAATCCACTTATCTTGGGTCGGGAAAGGAACTAACGCCGTTCCTATGAGAGGTGTATATGGTCCTCTTATATCTGCTATCACTGTGACCCCAAACTTTAAAATTCCTTCAAATGGATTGTCTGCTGGAGCAATTGCTGGAATTGTGGTTGGATCATTGGCGTTTATTATGCTGATACTATTTGTCCTTTGGAAGATGGGTTACCTTTGTGGGAAAGATCAAACAGACAAAGAACTCCTAGAATTAAAAACAGGCTATTACAGTTTGAGACAAATTAAAGCTGCTACTAATAACTTTGATCCAAAAAATAAGATAGGTGAAGGAGGATTTGGGCCAGTTTTCAAGGGTGTACTGTCAGATGGTGCTGTGATTGCTGTTAAACAGCTCTCCTCCAAATCAAAGCAAGGGAACCGTGAATTCGTTACCGAAATAGGCATGATATCTGCTTTGCAGCATCCAAATCTTGTGAAGCTTTATGGATGTTGCATTGAAGGAAACCAATTGCTTCTTATATATGAATACATGGAGAACAATAGTCTTGCTCGTGCTCTTTTCGGTAAACCAGAACAAAGGTTGAACTTGGACTGGCGCACAAGAATGAAGATCTGTGTAGGGATAGCAAGAGGTTTAGCTTATCTTCATGAGGAATCAAGATTGAAAATAGTACATAGAGATATTAAAGCAACCAATGTCTTACTCGATAAGAATCTGAATGCCAAGATCTCTGATTTCGGTTTAGCCAAGCTTGATGAAGAAGAAAATACTCATATCAGCACAAGAATAGCTGGGACAATAGGTTACATGGCTCCTGAGTATGCTATGCGGGGTTACTTGACTGACAAGGCAGATGTCTATAGCTTCGGAGTTGTAGCTTTAGAGATTGTCAGTGGAATGAGCAACACAAATTATAGACCAAAAGAGGAGTTTGTGTATCTTCTAGATTGGGCCTATGTTCTCCAAGAACAAGGAAACCTTCTGGAATTAGTGGATCCAAGTCTTGGTTCAAACTATTCCTCAGAAGAGGCCATGAGAATGCTGCAATTGGCACTCCTTTGCACCAATCCATCTCCAACTCTTAGACCACCAATGTCATCTGTAGTGAGCATGCTTGAAGGAAATACTCCGATTCAAGCGCCGATAATCAAACGCAGCGATAGTGCAGCTGGTGCAAGATTTAAAGCCTTTGAGCTTCTATCACAAGATAGCCAACCCAATGTTTCTTCGACATTCTTACAAGACAGTAAAAATGGACCATGGATTGACTCTTCCATATCTTATCCAAGTAAAGATGAATATTCTTCTTCTGATAAGCTTATTTGA 3027 0.3895 MFFLMSSFKHVSMFFFLFLAFNCFSMFGSNAQLLPQDEVKLLQTISDKVSKLNWKVTQRSCNVEDKGFGNENIFKDQITRNVTCDCTFNSSTVCHVTMILLKGLNISGVLPNEFGNLTHLKVLDLTRNYLNGSIPRSFGRLSSLVRLSVLGNRLSGPIPSEIGDISTLQEELNFEDNLLEGPLPPSLGNLRNLQKLMLSANNFTGTIPEAYGNLKNLTNFRIDGSSLSGKIPSFIGNWTKLERLDLQGTSLEGPIPPAVSLLKNLKELRISDLKGQTTMTFPDLKDLKRLMRLELRNCLITGPIPDYIVELENLKTIDLSSNRLTGPIPDSLQDLESINFVFLTNNSLSGTIPGWILSNKQNFDLSFNNFTEASASDCQLLDVNLASSISPSSNTSLSCLTVDLPCSGKPRYHSLFINCGGPATEFDDYEYEADEHLRGISNFVPSSDGKWAYSSTGVFLGNEKADYVARNVFSLNINGSDYYQTARIAPISLKYFGFCMLKGNYNVKLHFAEIMFSNDQTFSSTGRRIFDVSIQGHKYLKDFNIMEAAGEVGKGIIREYNVDVNDSTLEIHLSWVGKGTNAVPMRGVYGPLISAITVTPNFKIPSNGLSAGAIAGIVVGSLAFIMLILFVLWKMGYLCGKDQTDKELLELKTGYYSLRQIKAATNNFDPKNKIGEGGFGPVFKGVLSDGAVIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGKPEQRLNLDWRTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGMSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSNYSSEEAMRMLQLALLCTNPSPTLRPPMSSVVSMLEGNTPIQAPIIKRSDSAAGARFKAFELLSQDSQPNVSSTFLQDSKNGPWIDSSISYPSKDEYSSSDKLI* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1638 1008 Gene3D Transferase(Phosphotransferase) domain 1 744 953 - -
Mal4g1638 1008 Pfam Leucine rich repeat 96 154 IPR001611 GO:0005515
Mal4g1638 1008 Pfam Leucine rich repeat 289 348 IPR001611 GO:0005515
Mal4g1638 1008 MobiDBLite consensus disorder prediction 971 1002 - -
Mal4g1638 1008 SUPERFAMILY L domain-like 79 402 - -
Mal4g1638 1008 Pfam Protein tyrosine and serine/threonine kinase 671 938 IPR001245 GO:0004672|GO:0006468
Mal4g1638 1008 ProSiteProfiles Protein kinase domain profile. 668 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1638 1008 Gene3D Ribonuclease Inhibitor 277 383 IPR032675 -
Mal4g1638 1008 Gene3D Phosphorylase Kinase; domain 1 637 743 - -
Mal4g1638 1008 CDD STKc_IRAK 674 941 - -
Mal4g1638 1008 SMART serkin_6 668 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1638 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Mal4g1638 1008 MobiDBLite consensus disorder prediction 971 1008 - -
Mal4g1638 1008 Pfam Malectin domain 415 596 IPR021720 -
Mal4g1638 1008 Gene3D Ribonuclease Inhibitor 171 276 IPR032675 -
Mal4g1638 1008 PANTHER - 74 979 - -
Mal4g1638 1008 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 74 979 - -
Mal4g1638 1008 SUPERFAMILY Protein kinase-like (PK-like) 652 940 IPR011009 -
Mal4g1638 1008 Gene3D Ribonuclease Inhibitor 40 170 IPR032675 -
Mal4g1638 1008 Gene3D - 413 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1638 Mal-Chr4 27804788 27814461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1638 14 999 Receptor kinase-like Gene Family AT1G53440 62.512 0.0 1234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g1638 PK_Tyr_Ser-Thr 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1638 - - gmx:121173337 1533.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1638 4 27804788 27814461 Mal4g1638 4 27804788 27814461 ECH