Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1619 ATGACTGAAGTGGGTGTTGAAAGAGAATATGAACGAGATGGTGGAAGCACTAATATGAACGTCATTGAACTAGATTCAAATGGGTATCGTTTTAAATATACTCTTTTTGGAGAATACGTTGAACAGTTGAACTCTTTTCTATCTTCTGGTAAATCTGAAAATGTTGTTGTTGCCATTATGTTGGCAAAAGTTAAATTGTTTCAAAGAAAAGCAGCGTTACAAAATACATTTTCTTCAACTAAGATTATCTTCAATCCTGAAATTAATGAAAACACCTATTTTATTGTTTTGGGAACAATAAACGAGATTATTGATGATGATGGATGGTGGTATACCGCTTGCTCATGCAACAAAAAGGTGTATGCTGATTCTAACATGTACTTTTGTGAAAAGTGCAATCGTCATATTGTGCATGTCACACCTAGGTACAAAATCAAGATTCAAGTAATTGATGACACTGATAGTGCACTTTTTGTTGTTTTTGATCGAGATATTTCTGATCTGCTTAATAAATCATGTTCTGACATGATTGAAGCCAACAACATTGTTGGTGATTCATCTTATGAGTTGCCAAATGAGATCACACAATTGGTTGGTATCGAGTTATTGTTTAAGGTTGATGTGAGTGTTGGATTCAACTCTAGGTTTGAATGTAGCTATCGTGCTAAGAAACTTACCAACGATGCAAACGTGCTTTTAAAGTTTAAGGAAGGTGAAGCAATTGAGGATGATGTGGTCAATGAAGCTAATGTTATGAGTCGTTATGCTTCGAAGATAACTGGACTCAAGAATGATAATGTTGTCATGGGTGATCTTATTGGTGCTTCCATACGAAGAACATTGATTTATAAGTTCAAGGAGCAACTCCAAGAGGGAGTGGATTACACAATTTACTCATTTGATGTTGTTTCTAGCAGTGGTTCTTATAGATCTTCATATGTAATCGGAGTCATGATTGGAGTGGGTGTTGAAAGAGAATATGAAAGAGATGGTGGATGTAATAGAAGTCATGACTACAGTGGTTTTGTTAACAAAGAAATTACTTCTCCATCTCTTGCTACAACATCAAACGTCTCAACACCCAATTCCTTATTAGCATGCTCCAGTAACGGACAACATAATCATACAATACCATGA 1137 0.3536 MTEVGVEREYERDGGSTNMNVIELDSNGYRFKYTLFGEYVEQLNSFLSSGKSENVVVAIMLAKVKLFQRKAALQNTFSSTKIIFNPEINENTYFIVLGTINEIIDDDGWWYTACSCNKKVYADSNMYFCEKCNRHIVHVTPRYKIKIQVIDDTDSALFVVFDRDISDLLNKSCSDMIEANNIVGDSSYELPNEITQLVGIELLFKVDVSVGFNSRFECSYRAKKLTNDANVLLKFKEGEAIEDDVVNEANVMSRYASKITGLKNDNVVMGDLIGASIRRTLIYKFKEQLQEGVDYTIYSFDVVSSSGSYRSSYVIGVMIGVGVEREYERDGGCNRSHDYSGFVNKEITSPSLATTSNVSTPNSLLACSSNGQHNHTIP* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1619 378 CDD RPA1_DBD_B_like 1 90 - -
Mal4g1619 378 SUPERFAMILY Nucleic acid-binding proteins 3 94 IPR012340 -
Mal4g1619 378 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 1 180 - -
Mal4g1619 378 PANTHER REPLICATION FACTOR A 1, RFA1 1 180 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal4g1619 378 Pfam Replication factor-A C terminal domain 93 208 IPR013955 -
Mal4g1619 378 SUPERFAMILY Nucleic acid-binding proteins 89 212 IPR012340 -
Mal4g1619 378 Gene3D - 63 234 IPR012340 -
Mal4g1619 378 CDD RPA1_DBD_C 93 210 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1619 Mal-Chr4 27347602 27351337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1619 82 209 Core DNA Replication Machinery Family AT5G08020 26.515 5.11e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1619 - - mtr:MTR_2g048560 241.121