Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1601 ATGGAGAATCTACTTTGGCTTCCTACAAATTATGGCAAAAAAGCAATAGAACAAGAGTTGATAAGAGGACGTGACATGGCAAATCAATTACTTGAAGTACTAACTTTTGATGATAAGTCAAATATTAGAGAAGTTAAAGAGTCAAAAACAAAATCATCTAAATTGTTACCCTTAAATATTGTTGCTGAATATCTTGTGCGTGAGGTGCTCAAATCATTGACAAATACACTTTTGCTTTTGAACAATTGCAAAGATTCCAATAATGTGGCTGTTCCTATAACTGTTAGAGATTTTTCTTTCTCAACTAATTGCCCTAAGATGGAGGAGGATTTGGATGGAGCTTACAAGAAACTCAAAACTCTCAACACCAAAAATCCAAAAGGGTCGAACAAGAGAAAGTCAAGTGCACCAACTTGGAAAAAGACGGCCTCAGTATTGATTGATGATGGTCATACATGGAGACAGTACGGACAAAAAATGATAGCAAATGCCAAATATTTTAGCAGTCAAACATGTTCAAAGAACTCAAAAGAACCCTCCATTGTACCGGACTACATATTATGGCCATCACACTTGCAAAAGTTCTTTCCATTCAACATAAATTTGGATCCAATTTTGTCTTCTAATGACTCTTCTATATTACTTAGTTTCAATAACAACATTACAAGTAATGAAAAGTATCCACTTCAGCCATCACAATCTACACAAGGGGATTCCATGGAAGTAATCTATGATGATCATTTTTCCCAAAACCAATTGTCTTCATCAGAGAACCTCCAATTATGTGATTTTGATGTTTATTTCGATTATTTGAGACATGCCACTATGTTATCATCGAGTGAATCTTTTGAATTTGAGAGTGTATGTCATTAG 873 0.3448 MENLLWLPTNYGKKAIEQELIRGRDMANQLLEVLTFDDKSNIREVKESKTKSSKLLPLNIVAEYLVREVLKSLTNTLLLLNNCKDSNNVAVPITVRDFSFSTNCPKMEEDLDGAYKKLKTLNTKNPKGSNKRKSSAPTWKKTASVLIDDGHTWRQYGQKMIANAKYFSSQTCSKNSKEPSIVPDYILWPSHLQKFFPFNINLDPILSSNDSSILLSFNNNITSNEKYPLQPSQSTQGDSMEVIYDDHFSQNQLSSSENLQLCDFDVYFDYLRHATMLSSSESFEFESVCH* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1601 290 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 199 287 - -
Mal4g1601 290 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 173 - -
Mal4g1601 290 Pfam WRKY DNA -binding domain 148 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal4g1601 290 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 199 287 IPR044810 GO:0003700
Mal4g1601 290 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 173 IPR044810 GO:0003700
Mal4g1601 290 SUPERFAMILY WRKY DNA-binding domain 143 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal4g1601 290 Gene3D WRKY domain 138 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1601 Mal-Chr4 26463509 26465867 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal4g1601 WRKY 0.00021 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1601 - - gmx:100792193 179.489