Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1574 ATGAGCACAAGTTTGAAAGGCTATAATCACACTTATTACAACAATCCAATCATGACAAATAGTAGTAATAATAATAATGGATCATCATCAGAGGATTACATTATGAATGGTTGTTATCCATGGCCACCAAGATCATACACATGTAGCTTTTGTAGAAAAGAATTCAAATCAGCTCAAGCACTTGGTGGTCACATGAATGTTCATAGAAGGGATAGAGCAAGACTTAGACAATCATCACCACCAACTCATCATGAATCTCAACCTCAAGGTTCTTCTATGCTTCATGTTAACCTTAATAATAACCCTACTATCACTACTAACCCTAATTTATTCTCTTCATCTTCTTCATCATTATCATCCTCTTCAACAACAACTCTTAAGCCTATTACTTGCACATTACCCTTGTTTGTTGTGGATGGTATTTTGTTGAACCCTAGTTTGAGCAAAAAGACCTCAGAGAAATCAAAGATGGAAGAATGTGAAGATGAGTGTAGAATGGTGAAGAAAAATGAGATTTTAAGGATGGATTTGGAGATAGGTTTGCCAGGAGATTATGATAACTTGGATCTTGAGCTTCGTTTGGGTACTACTACTACTTATTCTAATTAG 609 0.353 MSTSLKGYNHTYYNNPIMTNSSNNNNGSSSEDYIMNGCYPWPPRSYTCSFCRKEFKSAQALGGHMNVHRRDRARLRQSSPPTHHESQPQGSSMLHVNLNNNPTITTNPNLFSSSSSSLSSSSTTTLKPITCTLPLFVVDGILLNPSLSKKTSEKSKMEECEDECRMVKKNEILRMDLEIGLPGDYDNLDLELRLGTTTTYSN* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1574 202 Gene3D Classic Zinc Finger 42 101 - -
Mal4g1574 202 SUPERFAMILY beta-beta-alpha zinc fingers 43 72 IPR036236 -
Mal4g1574 202 MobiDBLite consensus disorder prediction 80 122 - -
Mal4g1574 202 SMART c2h2final6 46 68 IPR013087 -
Mal4g1574 202 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 1 198 - -
Mal4g1574 202 ProSitePatterns Zinc finger C2H2 type domain signature. 48 68 IPR013087 -
Mal4g1574 202 Pfam C2H2-type zinc finger 46 70 - -
Mal4g1574 202 PANTHER OS07G0101800 PROTEIN 1 198 - -
Mal4g1574 202 MobiDBLite consensus disorder prediction 73 122 - -
Mal4g1574 202 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 73 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1574 Mal-Chr4 25521878 25522486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1574 25 195 C2H2 Transcription Factor Family AT3G23130 35.149 6.12e-28 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal4g1574 zf-C2H2_6 1.2e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1574 - - gmx:100781722 183.341