Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1573 ATGGAAAGAGATATGATACCTTGGTTGAAACCCCAAATCGGAGAAGAGCGGTACGTGAACAACATACCACCTCATATTGAAGAACTTATCCCAAATCTACAAATCCACACTCAACAACAAAACATTGTCGATCCTTCAGATCCAAACACTTATGCTCTTATGCACGATTTAAGTTCCTCCTTTTTAATGCCACCGCCCAAATCCAATTTCTCAAATCTACTAAATACCAGCAACAATATCAACATAAGTGGCACCACTACCACCACCACCACCATTATCAACAATGACAACAACAACCCATTTGGTAATGTCTTCAATTTAGAATCCCAAGGTGCTTGCCAACCACCATTGTCAATTCCGCGATTTACCTCGACATGGTTGAAGGAGTTTGAGAAAGAGATGGGGGGAAATGGAAATGGGAAAGTTGAAGGAGGATTGAATTATGATTCCAACGATATTGTTGATGTTGGGAAGATTGGGAACCATGGGAAAAATGAGGTTATTAATTATAATGGAAATAACAATGTTGGTGGTAGTAGTAATAATAACATCATAGATAATAATGATGATGAAGATTGTGTTGTCGAGGAGGACCGAAAAGGGAAGAAGAAGGAAAACCCATCAAAGAGTCGCATGGCTGAGAAGCGGCGCAGGCAGAAACTCACCGATAGGATGCACATACTTCGTTCTACTGTGCCAAAGATTACCAAGATGAATAAAGTTTCAATACTTGGGGATGCTATTGGTTACTTGAAGGAGTTACAACAAGAAGTTAATGATCTTCAAAGTGAACTAGAGTCAGGTTCTCCTGGATCATCTATGCCATCACCTACCATGTCAACACTTCCAGTTCGAATGAAAGAAGAGTTATGTCCTAGCAATGTGTCAAGCCTTAAAAACCAACTAGCAAAGGTAGAGGTTGGAGTAGGGGAAGGGGGGATATTCAACATCCATATGTTTTGTGCCTCCAAACCAGGTGTTTTGCTGTCGACTATGAGGGCATTGGATAGTCTTGGATTGGATGTTCACCAGGCTAACATAAGTTGTTTCAATGATTTTTCTTTAGACGTTTTCAAAGCTGAGGTGAAAGCAGCAGTCCTGGAGGATCTAGAGATATGTTCAGTTTAG 1128 0.4051 MERDMIPWLKPQIGEERYVNNIPPHIEELIPNLQIHTQQQNIVDPSDPNTYALMHDLSSSFLMPPPKSNFSNLLNTSNNINISGTTTTTTTIINNDNNNPFGNVFNLESQGACQPPLSIPRFTSTWLKEFEKEMGGNGNGKVEGGLNYDSNDIVDVGKIGNHGKNEVINYNGNNNVGGSSNNNIIDNNDDEDCVVEEDRKGKKKENPSKSRMAEKRRRQKLTDRMHILRSTVPKITKMNKVSILGDAIGYLKELQQEVNDLQSELESGSPGSSMPSPTMSTLPVRMKEELCPSNVSSLKNQLAKVEVGVGEGGIFNIHMFCASKPGVLLSTMRALDSLGLDVHQANISCFNDFSLDVFKAEVKAAVLEDLEICSV* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1573 375 Coils Coil 244 264 - -
Mal4g1573 375 Gene3D - 195 268 IPR036638 GO:0046983
Mal4g1573 375 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 205 254 IPR011598 GO:0046983
Mal4g1573 375 CDD ACT_UUR-ACR-like 317 358 - -
Mal4g1573 375 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 115 365 - -
Mal4g1573 375 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 209 280 IPR036638 GO:0046983
Mal4g1573 375 SMART finulus 211 260 IPR011598 GO:0046983
Mal4g1573 375 MobiDBLite consensus disorder prediction 194 220 - -
Mal4g1573 375 Pfam Helix-loop-helix DNA-binding domain 211 255 IPR011598 GO:0046983
Mal4g1573 375 MobiDBLite consensus disorder prediction 173 220 - -
Mal4g1573 375 MobiDBLite consensus disorder prediction 173 188 - -
Mal4g1573 375 PANTHER TRANSCRIPTION FACTOR SCREAM2 115 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1573 Mal-Chr4 25495910 25503961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1573 207 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 61.585 1.63e-61 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal4g1573 HLH 3.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1573 - - mtr:MTR_3g104100 371.703