Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1548 ATGTTCGATACCAAGCCACTTGTATCTGCAATGGCGTCAATTGTGCTAATGCGAACCATCACAAATGAGCTCATTCCTCATGAGCTCCTACACTTTTTTCAATCTGGACTTGATCATCTTTCTCGCCAATTTTCGGCGCAATTCACCCTAGTCATTGAAGAATTTCAAGGGATGGCAAGAAACCAAGTTTTTGAGGCTGCACAAGCCTATCTAGGAACTAAAGCAACAATCTCAGCAGAAAGAGTTAAAGTAAGCAAATCTGAAGACCATAAAAAACTTTCTTTCAATATTGATAGAAATGAAGAAGTGAGTGATGATTTTGAAGGTGTTAGAGTAAAGTGGAAATTAATATGCATACAAGTCGATTCATCACGGATTCGACATTATGATAATGACTCCTCGCCCGTGTCAGAAATAAGATCCTATGAACTTACTTTTCACAAGAAACACAAGAACAAGATCTTTGATTCATATTTGCCTTATGTGATGGAGATAGCTAAACAAATTAAACAAGGAGACATGGCAATCAAGATTCACTCAAATGAGTATAATTGCTGGAGTCATGAACCTGTCAAGTTCAACCATCCAATGAGTTTCAACACTCTTGCAATTGATGAAGAACTTCAAAGGGATATTATCAATGATTTGGATCAATTTGTGAAGGCTAAAGAGTTTTATAGAAGAACAGGGAAAGCTTGGAAACGCGGTTACTTGTTGTATGGTCCTCCTGGTACTGGAAAGTCTAGCTTGATTGCATCCATGGCTAACTATCTCAACTATGATATCTATGATTTGGATCTCACTGATGTAAGGGATAATAAGTGCTTGAAGCAACTTATTCTTGGCATGCCCAACCGTTCTATACTTGTGATAGAGGATATTGATTGCACTGTAAATTTGCAAAACCGAGAAGAAGATGAAGAAGTTGTTGATAATGGATACAATAAGATGACACTTTCAGGACTATTGAATGCAGTAGACGGTCTTTGGTCATGTTGTCGAGAGGAACACATAATTGTTTTCACGACAAATCACAAAGAAAGACTTGATCCTGCTCTGTTAAGGCCTGGTAGAATGGACAAGCAAATTCATTTGTCATATTGCAACTTTTCTGCTTTTAAGAAATTGGTTATTAACTACCTTTGCATTACTCAACATGAACTCTTTGAAAAGATTGAAGTTCTTTTAGGACAAGTTGCAGTTACTCCAGCTGAAATTGCAGAAGAGCTAACAAAGGATGTTGATGCTACAGAATGCCTACAAGACCTTATCAAATTCCTCCAAGCCAAGACAATGATCAAGGAAGAGATAAAGAATGAAGAAAATATCAAAGAAGAAAGTGAACTAGGTAGGGAAAATATATAG 1365 0.37 MFDTKPLVSAMASIVLMRTITNELIPHELLHFFQSGLDHLSRQFSAQFTLVIEEFQGMARNQVFEAAQAYLGTKATISAERVKVSKSEDHKKLSFNIDRNEEVSDDFEGVRVKWKLICIQVDSSRIRHYDNDSSPVSEIRSYELTFHKKHKNKIFDSYLPYVMEIAKQIKQGDMAIKIHSNEYNCWSHEPVKFNHPMSFNTLAIDEELQRDIINDLDQFVKAKEFYRRTGKAWKRGYLLYGPPGTGKSSLIASMANYLNYDIYDLDLTDVRDNKCLKQLILGMPNRSILVIEDIDCTVNLQNREEDEEVVDNGYNKMTLSGLLNAVDGLWSCCREEHIIVFTTNHKERLDPALLRPGRMDKQIHLSYCNFSAFKKLVINYLCITQHELFEKIEVLLGQVAVTPAEIAEELTKDVDATECLQDLIKFLQAKTMIKEEIKNEENIKEESELGRENI* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1548 454 Gene3D - 364 434 - -
Mal4g1548 454 SMART AAA_5 233 369 IPR003593 -
Mal4g1548 454 PANTHER BCS1 AAA-TYPE ATPASE 4 443 - -
Mal4g1548 454 Pfam Domain associated at C-terminal with AAA 25 117 IPR025753 -
Mal4g1548 454 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 4 443 - -
Mal4g1548 454 Gene3D - 187 363 IPR027417 -
Mal4g1548 454 CDD AAA 234 367 - -
Mal4g1548 454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 410 IPR027417 -
Mal4g1548 454 Pfam ATPase family associated with various cellular activities (AAA) 238 366 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1548 Mal-Chr4 24836763 24838641 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1548 209 369 Calmodulin-binding Proteins AT3G56690 27.168 7.12e-09 56.2