Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1546 ATGTTCGATATGAAGCCATTTGTATCTGCAATGGCCTCAATTGTGCTAATGCGAACCATCACGAATCAACTCATTCCTCACGAGCTCCTAACATTTTTTCAATCGGGACTTGATCATCTTTGTCGCCAATTTTCGGCGCAATTCACCATAGCTATTGAAGCCTATCTAGGAACTAAAGCAACAATCTCAGCAGAAAGAGTTAAAGTAAGCAAATCTGAAGATCATAAAAAAAGTGATGTTTTTGAAGGTGTTAGTGTAAGGTGGAAACTAATTTGCATACAAGTTGACTCTTCGCGGATTCGACATTATGATAATGACTCCTCGCCTGTGTCAGAAATAAGATCCTATGAGCTAACTTTTCACAAGAAACACAAGAACAAGATCTTCGAATCATATTTGCCTTATGTGATGGAGATAGCTAAACAAATTAAACAAGGAAACTTGGCACTTAAGATTCACTCAAATGACTATAATCGTTGGTGTCATGAACCTGTTAAGTTCAACCATCCAATGACTTTCAACACTCTTGCAATTGATGAAAAGCTTCAAAGGGAAATTATGAATGATTTGGACAAATTTGTGAGGGCTAGAGAGTTTTATAGAAGAACAGGGAAAGCTTGGAAGCGCGGTTACTTGTTGTATGGTCCTCCTGGTACTGGAAAGTCTAGCTTGGTTGCAGCCATGGCTAACTATCTCAACTATGATATCTATGACTTGGATCTCACTGATGTACAAGATAATAAGAGCTTGAAGAAACTTATTATTGGCATGTCCAACCGTTCTATACTTTTGATAGAGGATATTGATTGCACTATAAATTTGCAGAACCGAGAAGAAGATAAAGAAGTTGTTAATAATGGATACAGTAAGGTAAAACTTTCAGGACTATTGAATGCTGTAGATGGTCTTTGGTCATGTTGTGGAGAGGAACACATAATTGTTTTCACAACAAATCACAAAGAAAGGCTTGATCCTGCTCTGTTAAGGCCTGGTAGAATGGACAAGCAAATTCATTTGTCATATTGCAACTTTTCTGCTTTTAAGAAATTGGTTATTAACTACCTTTGCATTACTCAACATGAACTCTTTGAAAAGATTGAAGTTCTTCTAAGACAAGTTCAAGTTACTCCAGATGAAATTGCAGAAGAGCTAACAAAGGTTGGTGATGCTACAGAATGCCTTCAAGACCTTATCAAATTCCTCCAAGCCAAGAAAATGATCATGATCAAGGAAGAGATTAAGAATGAAGAAAATATCAAATAA 1263 0.3666 MFDMKPFVSAMASIVLMRTITNQLIPHELLTFFQSGLDHLCRQFSAQFTIAIEAYLGTKATISAERVKVSKSEDHKKSDVFEGVSVRWKLICIQVDSSRIRHYDNDSSPVSEIRSYELTFHKKHKNKIFESYLPYVMEIAKQIKQGNLALKIHSNDYNRWCHEPVKFNHPMTFNTLAIDEKLQREIMNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLVAAMANYLNYDIYDLDLTDVQDNKSLKKLIIGMSNRSILLIEDIDCTINLQNREEDKEVVNNGYSKVKLSGLLNAVDGLWSCCGEEHIIVFTTNHKERLDPALLRPGRMDKQIHLSYCNFSAFKKLVINYLCITQHELFEKIEVLLRQVQVTPDEIAEELTKVGDATECLQDLIKFLQAKKMIMIKEEIKNEENIK* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1546 420 Pfam ATPase family associated with various cellular activities (AAA) 212 340 IPR003959 GO:0005524|GO:0016887
Mal4g1546 420 SMART AAA_5 207 343 IPR003593 -
Mal4g1546 420 Gene3D - 338 408 - -
Mal4g1546 420 CDD AAA 208 341 - -
Mal4g1546 420 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 4 413 - -
Mal4g1546 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 401 IPR027417 -
Mal4g1546 420 Gene3D - 162 337 IPR027417 -
Mal4g1546 420 PANTHER BCS1 AAA-TYPE ATPASE 4 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1546 Mal-Chr4 24776291 24777741 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1546 183 343 Calmodulin-binding Proteins AT3G56690 25.434 2.21e-10 60.8