Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1526 ATGTCACATTCACCTGAAAAACCCGAACCGGAAAAACCCGAATTAGACCAATTTTCCGATCGGTTTCGTGAAACGGTGAGTTTAGAAGCTAACAAACCGGATTTTCGTGAACTCGATCTGGGTTCACCTGTTTCGCCATTGAGGACACGTGGTGGACCGTCGGTGAGTAGTAGCTCAGGTTCTTCTGGATCTTTCTCCGGTGGTAGAATCGGGTCCAACCCGGTTTCCAAAAGATCCGATTCAGTGCAGAATAAAGATAATAGTAACTCCGGTGAACTTTCCGGTTCGAGTGAGAACTCTCCGACTGCGGATAGATCTGGTGGGAGTGTAAGAGGTTCGAAACCGGGTCACTCAAGATCCAATTCAGGATCCGGGTTGTTGCATTCGGGTCAAACGGTGAACTCTCCGCCGTTGAATGTTCTTCCTACCGGAAACATTTGTCCTTCCGGAAGGATCTTGAAAACCGGCATGGCGGCGAATCGGAGTTCGAGAAGTGATGTTCTTGGTTCTGGAACTGGGAACTATGGTCACGGTAGCATAATGCGCGGTGGTGTTGCAGGTGCTGGTGTCGTCGGCAAGGTAGAGACTAATATGAGAAGCAGCATTGGGGGTGATTTAGGAAAAAGAGGAGTGCATAGTGTGGATCCAGAAGAGCTAAAGAAAGCTGGGAATGAGCATTACAAAAAGGGTCATTTTGCAGATGCATTGAGTCTTTATGACCGTGCAATTGCGATGTCGCCGGGGAGTGCTTCTTACCGGAGCAACCGCGCTGCGGCGCTGACCGGTTTAGGAAGATTAGCTGAAGCTGTTAAGGAATGTGAGGAGGCTGTGAGATTGGATCCTAATTATTCTAGAGCTCATCATCGTTTGGCTTCACTTTTCATCAGGTTAGGACAAGTTGAGAATGCTAGGAAGCATCTATGTCATCCTGGATTGACGCCGGATCCGAGCGAGATGCAGAAGTTGAAAATGGTGGAAAAACATATTAATAAATGTGCAGATGTTAGGAGGGTAGGGGATTGGAAAAGTGTTGTGAGGGAACTTGATGCTGCTGTTGCTGCTGGAGCTGATTCTTCTCCTCAGCTCTTTATGTGTAGAGCAGAAGCCCTTTTGAAACTCCATCAAATTGATGATGCAGAATCAGTTTTGTCACATGTTCCGAAATCGGAGCCACGTACTAATAGTAATAATTCATCTTCTCAAGTAAGATTTTTTGGGATGCTTTCTGAAGCTTATTCCTACTTTGTCCGAGCTCAAATTGAGATGGCATTGGGAAGGTTTCAGAATGCAGTCACAGCTGCTGAGAAGGCGAGTCAGATTGATTCGCGAAATCTTGAAGTTGCTGTTTTGCTTAACAATGTAAGGATGGTGGCAAGAGCTCGAGTTCGTGGCAATGATCTTTTTAAATCTGAACGGTTCACTGAAGCTTGCTCAGCATACGGGGAAGGTTTGAGATTGGACCCTTCTAATTCTGTTCTATATTGCAATAGAGCAGCGTGTTGGTTTAAGCTTGGTCAATGGGGAAAATCAATTGAAGACTCTAATCAAGCTTTACGTATCCAGCCAAATTATACAAAAGCTCTTCTTCGAAGGGCTACATCAAACAGCAAGCTGGAACGGTGGGAAGAAGCAGTTGAAGATTACGAGGTCTTACGAAAAGAACTTCCAAATGACAATGAAGTTGCTGAAGCTCTTTTCCATGCACAAGTTGCGCTAAAGAAATCTCGTGGAGAAGAAGTATATAATTTAAAATTTGGTGGTGAAGTGGAACAAGTATCAGGTCTTGAGCAGTTCAGATCTGCAATATCTTTACCAGGTGTCTCTGTTGTACATTTTGAAGTTGCTTCTAACTCCCAATGTGGACATTCAAGAAAACCCGACAGTTGCAACTGCTGA 1896 0.4499 MSHSPEKPEPEKPELDQFSDRFRETVSLEANKPDFRELDLGSPVSPLRTRGGPSVSSSSGSSGSFSGGRIGSNPVSKRSDSVQNKDNSNSGELSGSSENSPTADRSGGSVRGSKPGHSRSNSGSGLLHSGQTVNSPPLNVLPTGNICPSGRILKTGMAANRSSRSDVLGSGTGNYGHGSIMRGGVAGAGVVGKVETNMRSSIGGDLGKRGVHSVDPEELKKAGNEHYKKGHFADALSLYDRAIAMSPGSASYRSNRAAALTGLGRLAEAVKECEEAVRLDPNYSRAHHRLASLFIRLGQVENARKHLCHPGLTPDPSEMQKLKMVEKHINKCADVRRVGDWKSVVRELDAAVAAGADSSPQLFMCRAEALLKLHQIDDAESVLSHVPKSEPRTNSNNSSSQVRFFGMLSEAYSYFVRAQIEMALGRFQNAVTAAEKASQIDSRNLEVAVLLNNVRMVARARVRGNDLFKSERFTEACSAYGEGLRLDPSNSVLYCNRAACWFKLGQWGKSIEDSNQALRIQPNYTKALLRRATSNSKLERWEEAVEDYEVLRKELPNDNEVAEALFHAQVALKKSRGEEVYNLKFGGEVEQVSGLEQFRSAISLPGVSVVHFEVASNSQCGHSRKPDSCNC* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1526 631 MobiDBLite consensus disorder prediction 49 142 - -
Mal4g1526 631 Gene3D Tetratricopeptide repeat domain 214 577 IPR011990 GO:0005515
Mal4g1526 631 SUPERFAMILY TPR-like 217 321 IPR011990 GO:0005515
Mal4g1526 631 ProSiteProfiles TPR repeat profile. 216 249 IPR019734 GO:0005515
Mal4g1526 631 SUPERFAMILY TPR-like 325 454 IPR011990 GO:0005515
Mal4g1526 631 SMART tpr_5 411 444 IPR019734 GO:0005515
Mal4g1526 631 SMART tpr_5 457 490 IPR019734 GO:0005515
Mal4g1526 631 SMART tpr_5 216 249 IPR019734 GO:0005515
Mal4g1526 631 SMART tpr_5 491 524 IPR019734 GO:0005515
Mal4g1526 631 SMART tpr_5 250 283 IPR019734 GO:0005515
Mal4g1526 631 SMART tpr_5 360 393 IPR019734 GO:0005515
Mal4g1526 631 SMART tpr_5 525 558 IPR019734 GO:0005515
Mal4g1526 631 MobiDBLite consensus disorder prediction 1 142 - -
Mal4g1526 631 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL1 19 621 - -
Mal4g1526 631 MobiDBLite consensus disorder prediction 1 36 - -
Mal4g1526 631 Pfam Tetratricopeptide repeat 412 442 IPR019734 GO:0005515
Mal4g1526 631 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 19 621 IPR044534 -
Mal4g1526 631 Pfam Tetratricopeptide repeat 222 283 - -
Mal4g1526 631 SUPERFAMILY TPR-like 462 574 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1526 Mal-Chr4 23792787 23795721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1526 456 601 U-box Gene Family AT3G07370 28.962 1.41e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1526 - - adu:107459775 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1526 4 23792787 23795721 Mal4g1526 4 23792787 23795721 ECH