Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1515 ATGATGAACAACGGAGTACACAGTCTCCGCACGTGCTTCCGCCTCCCGGAGCAGCCATTATTCCGAGCAACACCACTCTCCTACAATTTCCGGCGCCGGTTTTTCGTCACCGCATCGTTAACGGAGAAAAAGAAAGAGAAGGTGATAGTTATTTCTGGACCCACCGGTTCTGGCAAGAGCCGTCTCGCAATGGAACTCGCAAAGCGCATCAATGGTGAAATTGTTAGTGCCGATTCTGTTCAGGTGTATAAGGGTCTTGATATTGGATCTGCCAAGCCTTCATTAAATGATAGAAAGGAAGTGCCGCATCATCTGGTTGACATACTTCACCCATCTGAAGATTATTCTGTTGGGCAGTTTTTTGAGGATGCAAGGCAAGCGACAAGATCTATTCTTGACAATGGCCGTGTTCCAATTGTTGTTGGGGGCACTGGACTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTGCCTAAAGCCTCTGCAGAGATAACATCTGAAGCATGTATGGAGTTAGCTGAACTACAAAGAAATGACGACTGGGAAGCTTCTGTACAGTTGGTGGTAAAAGCAGGTGATCCAAAGGTCCAACATATAGCAGTGAATGATTGGTACCGATTACGGCGTAGTCTAGAGATTATTAAGTCTAGTGGATCACCTCCTTCTGCTTTTCGGGTACCATATGATTCTTTCAGGGAACAGGATGATTGTAGAGTTGCTGATGGTTCTGGTTCATCTGATATGAACATTAATAAAGATGCAATGAAAGAAACCGATTCAACAAAGTTAGACTACGATTTCATGTGTTTTTTCCTTTCTAACGACAGACTTGACCTCTACAAATCAATTGATTATCGGTGTGAAGATATGATATTAGGAGGGGATGGCCTTTTGTCTGAGGCTCAATGGCTTCTTGATACCGGTCTTCATCCAAACTCCAACTCTCCCACAAAAGCAATTGGTTACAGACAAGCCATGGATTACTTACTAGGATGCAGAGAACAAGGGGGTCAGAGTTCAGCTGGAGAATTTTACAGATTCTTGTCTGAATTTCAAAAAGCTTCAAGGAATTTCGCAAAACGACAGTTGACTTGGTTTCGTAATGAACGTATATACCATTGGCTTGATGCTTCTAAACCTCTGGAAACCGTCCTGAATTTCATTCATGATGCATACCATGATCAGAATGGAAGTCTTTTTGTGCCTGAACACCTTAGAATGTCGAGAGATATTACTAATTCTCGAATAGCTGCTAAACTAAAGGCTTACCGCTCCAGAAATAGGCATTTTGTGAACGGGGAAGATTGTTATCCGATTTTGGAATGGATAAAGAAGACTCAGAAGTGA 1350 0.4259 MMNNGVHSLRTCFRLPEQPLFRATPLSYNFRRRFFVTASLTEKKKEKVIVISGPTGSGKSRLAMELAKRINGEIVSADSVQVYKGLDIGSAKPSLNDRKEVPHHLVDILHPSEDYSVGQFFEDARQATRSILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASAEITSEACMELAELQRNDDWEASVQLVVKAGDPKVQHIAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREQDDCRVADGSGSSDMNINKDAMKETDSTKLDYDFMCFFLSNDRLDLYKSIDYRCEDMILGGDGLLSEAQWLLDTGLHPNSNSPTKAIGYRQAMDYLLGCREQGGQSSAGEFYRFLSEFQKASRNFAKRQLTWFRNERIYHWLDASKPLETVLNFIHDAYHDQNGSLFVPEHLRMSRDITNSRIAAKLKAYRSRNRHFVNGEDCYPILEWIKKTQK* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1515 449 Hamap tRNA dimethylallyltransferase [miaA]. 48 387 IPR018022 GO:0008033
Mal4g1515 449 Gene3D - 156 227 - -
Mal4g1515 449 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 38 448 - -
Mal4g1515 449 TIGRFAM miaA: tRNA dimethylallyltransferase 48 225 IPR018022 GO:0008033
Mal4g1515 449 Pfam IPP transferase 81 370 - -
Mal4g1515 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 180 IPR027417 -
Mal4g1515 449 Gene3D - 45 424 IPR027417 -
Mal4g1515 449 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 38 448 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1515 Mal-Chr4 23428540 23434091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1515 51 330 C2H2 Transcription Factor Family AT2G27760 25.517 1.42e-19 89.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1515 4 23428540 23434091 Mal4g1515 4 23428540 23434091 ECH