Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1508 ATGAACGGTGGAGATATAGTGGAAGTTGACGGCGGTCACATTATAAGGTCAAGAGGTCGAAAAGACCGTCATAGTAAAGTTTGCACGGCGAAAGGGCCGAGAGACAGACGCGTCCGTCTCTCGGCCCATACCGCTATTGAATTTTACGATGTTCAAGATCGACTGGGCTTTGATAGGCCCAGTAAAGCACTTGATTGGCTCATTAATAAAGCTAAGCCCGCCATCGATCAACTTGCTCAACTTCCTCCATGGAAACCATCTCTCACCAAACAACAGCAACAAAACGACGACGTTTTAGAGAAATTGCAGAATCAAAACGAAAACGAGTTTCATTTTCTTCAGAATTTCAACAATAATAGTAACAGTAACAGTTTCATTCCGTTTCAAAATGAAATTGGTGAAACGACGCCGTTTTCGCATAGTAATGATTTGAGATTATCTCTTCAACAGAATCAGAATCAGCACGTGCTTTTCGCCGGAAATTTTGATGGAATGATGACGTGGAATTCCGGTGGTGGTGGTGGTACTGCTACTGTTGATACTGGTGGTAGCGGTGGTGGTGGCGGTGGTGGTGATAGTAATGATGATGCTTCAGGTGGTGGAGGTTTTGTGTTTCATGCTCCTTCGCCGGTGGTTTTTCCGGCGGTGATGTATGGTCAGAATCAGTATTTTACTCAGAGGGGACCCCTTCAGTCCAGTTACAATCCTTCGGTTCGTGCTTGGATCGATGCGCCGGCGTTTGTTGCAGCGGATTATCGACGTCAGGCGGGTAGTTCGGATGCCGGATTTGCTTCTGGTGGCTTTTCTGGTTTCCGTGTGCCGGCACGAATTGGAGGTGATGATGAGGAGGTGCATGGCGGTTTATCTGACAGACCGTCTTCTGCTTCCTCCGATTCTCGCCGTTGA 906 0.4735 MNGGDIVEVDGGHIIRSRGRKDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGFDRPSKALDWLINKAKPAIDQLAQLPPWKPSLTKQQQQNDDVLEKLQNQNENEFHFLQNFNNNSNSNSFIPFQNEIGETTPFSHSNDLRLSLQQNQNQHVLFAGNFDGMMTWNSGGGGGTATVDTGGSGGGGGGGDSNDDASGGGGFVFHAPSPVVFPAVMYGQNQYFTQRGPLQSSYNPSVRAWIDAPAFVAADYRRQAGSSDAGFASGGFSGFRVPARIGGDDEEVHGGLSDRPSSASSDSRR* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1508 301 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 111 IPR005333 GO:0003700
Mal4g1508 301 ProSiteProfiles TCP domain profile. 20 78 IPR017887 -
Mal4g1508 301 MobiDBLite consensus disorder prediction 173 201 - -
Mal4g1508 301 MobiDBLite consensus disorder prediction 274 301 - -
Mal4g1508 301 Coils Coil 88 108 - -
Mal4g1508 301 PANTHER TRANSCRIPTION FACTOR TCP4 133 300 - -
Mal4g1508 301 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 133 300 IPR005333 GO:0003700
Mal4g1508 301 Pfam TCP family transcription factor 19 121 IPR017887 -
Mal4g1508 301 PANTHER TRANSCRIPTION FACTOR TCP4 2 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1508 Mal-Chr4 23219549 23220454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1508 4 300 TCP Transcription Factor Family AT1G53230 40.599 2.67e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal4g1508 TCP 2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1508 - - cam:101504111 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1066 4 14902643 14903638 Mal4g1508 4 23219549 23220454 ECH
Mal7g3038 7 93790540 93791553 Mal4g1508 4 23219549 23220454 ECH
Mal4g1508 4 23219549 23220454 Mal4g1508 4 23219549 23220454 ECH