Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1470 ATGGAAAGCTTCTTCCACCACCACATGAACAATAACACTAACAACAACAACAATGATGCACATTTACCACCTGGTTTTCGTTTCCACCCTACAGATGAAGAACTCATCACATTCTACCTTCTCAAGAAAGTTCTTGACACTACTTTCACTGCAAGAGCCATAGCTGAAGTTGATCTCAACAAGTGTGAACCATGGGAGCTACCTGAGAAAGCTAAGATGGGTGAGAAAGAATGGTACTTCTTCAGTCTACGTGACAGAAAGTATCCAACTGGTTTGCGTACAAACAGAGCAACAGAAGCTGGTTATTGGAAAGCAACTGGGAAAGACAGAGAGATTTATAGCTCAAAAACTTACTCTCTTGTTGGTATGAAGAAAACCCTTGTTTTCTACAGAGGTAGAGCTCCTAAAGGTGAAAAGAGTAACTGGGTTATGCATGAATATCGTCTTGAGGGAAAATTTGCTTACCATTTTCTCTCTAGAAACTCCAAGGATGAATGGGTCATTTCACGTGTGTTTCAAAAGAGTAACACCGGAAATGGAAGCACCACCGTGACAGCCACCACAAGTGGTGCAAAAAAGACCAAAATAGCCTCAAACTCTGCCAGCAACAATAGCATGAGTCTCTGTCCTGAACCAAGTTCACCTTCTTCAGTTTACCTTCCTCCTTTACTTGATTCATCTCCTTACACCGCCGCATTCAACGGTGGTGGTCAAATGTGTAACTACAACAGCTCCAACAACAACACTGAACAAAAAGAGCACGTGTCCTGTTTCTCCACAACATCTACAACATCAAATGTTGTCTCTGTTCATAACAACTTCAACAACAACAATGGAAGTTTTGATCTTGTTTCTCCTTCTATGAATGCAACAATGGATCCTTTTGCAAGGTTTCAAAGAAATGTTGGTGTTTCTGCTTTTCCAAGCTTGAGGTCACTACAAGACAATCTTCAGCAGCCTTTCTTTTTCTCCTCCCTCGGGGTGGCTCAGCCTTTTCACGGTGGTGGTGGTGGTGATATTCTCGGTGGTTGGGGGATGCAGCCGGAGGAGCAAAGGGTGGTGGTTGATGGTGGTGGTCATAATATGGGAGGATTAGGTGGTGCTTCTGAACTTGATTGCATGTGGAACTATTAA 1134 0.4295 MESFFHHHMNNNTNNNNNDAHLPPGFRFHPTDEELITFYLLKKVLDTTFTARAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTYSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHFLSRNSKDEWVISRVFQKSNTGNGSTTVTATTSGAKKTKIASNSASNNSMSLCPEPSSPSSVYLPPLLDSSPYTAAFNGGGQMCNYNSSNNNTEQKEHVSCFSTTSTTSNVVSVHNNFNNNNGSFDLVSPSMNATMDPFARFQRNVGVSAFPSLRSLQDNLQQPFFFSSLGVAQPFHGGGGGDILGGWGMQPEEQRVVVDGGGHNMGGLGGASELDCMWNY* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1470 377 ProSiteProfiles NAC domain profile. 22 174 IPR003441 GO:0003677|GO:0006355
Mal4g1470 377 MobiDBLite consensus disorder prediction 1 20 - -
Mal4g1470 377 SUPERFAMILY NAC domain 9 174 IPR036093 GO:0003677|GO:0006355
Mal4g1470 377 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 345 - -
Mal4g1470 377 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 13 345 - -
Mal4g1470 377 Gene3D NAC domain 31 179 IPR036093 GO:0003677|GO:0006355
Mal4g1470 377 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1470 Mal-Chr4 22446970 22448810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1470 1 377 NAC Transcription Factor Family AT5G53950 50.124 6.65e-120 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal4g1470 NAM 3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1470 - - cam:101501114 537.339