Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1466 ATGTCGAAACACATAACTCACGGCTTTCACTTGGTAAAGGGAAGATCATATCATGAAATGGAGGATTATCTTGTTGCTAGATTTAAGCAAATCGATAACCATGAATTAGGTTTGTTTGCAATATTTGATGGCCATGCTGGTCACAATGTACCTAACTATTTGCAGTCTCATTTGTTTGATAATATCTTAAAAGAGCCTGACTTCTGGACAGAACCTGTAAATGCTGTCAAGCAAGCGTATAGTATAACTGATTCTAGTATTTTAGAGAAGTCAGGTGAATTGGGTAGAGGGGGTTCAACAGCAGTTACCGCAATATTGATTGATGGACAGAAGTTAGTAGTAGCAAATATCGGGGATTCTCGGGCTGTCTTATCAAAGAAAGGTGTGGCCAAACAACTGTCAGTGGATCATGAACCAACCACAGAACACGAGGATATAAAAAATAGAGGTGGTTTTGTATCAAGATTTCCAGGGGACGTTCCGCGAGTTGATGGACGGTTGGCAGTGTCGAGGGCATTTGGAGACAAAAGCTTGAAGAAACACTTGAGTTCAGAGCCATATGTGACAGTGGAGAAGATAAATGAAGATGCAGAATTTGTTATATTAGCCAGTGATGGATTGTGGAAGGTAATGACAAATCAAGAAGCAGTTGATTGTATCAAAGATTTAAAGGATGCTCGGTCTTCAGCGAAGCGCCTCACTGAAGAAGCAGTTAACAGGAAAAGCAACGACGATATCTCTTGCATTGTTGTGAAACTTCAGTGA 765 0.4039 MSKHITHGFHLVKGRSYHEMEDYLVARFKQIDNHELGLFAIFDGHAGHNVPNYLQSHLFDNILKEPDFWTEPVNAVKQAYSITDSSILEKSGELGRGGSTAVTAILIDGQKLVVANIGDSRAVLSKKGVAKQLSVDHEPTTEHEDIKNRGGFVSRFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPYVTVEKINEDAEFVILASDGLWKVMTNQEAVDCIKDLKDARSSAKRLTEEAVNRKSNDDISCIVVKLQ* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1466 254 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 253 - -
Mal4g1466 254 PANTHER PROTEIN PHOSPHATASE 2C 1 253 IPR015655 GO:0004722|GO:0006470
Mal4g1466 254 SMART PP2C_SIG_2 15 253 IPR001932 -
Mal4g1466 254 ProSiteProfiles PPM-type phosphatase domain profile. 6 253 IPR001932 -
Mal4g1466 254 SMART PP2C_4 4 251 IPR001932 -
Mal4g1466 254 SUPERFAMILY PP2C-like 4 253 IPR036457 -
Mal4g1466 254 Pfam Protein phosphatase 2C 18 246 IPR001932 -
Mal4g1466 254 Gene3D - 3 254 IPR036457 -
Mal4g1466 254 ProSitePatterns PPM-type phosphatase domain signature. 38 46 IPR000222 GO:0043169
Mal4g1466 254 CDD PP2Cc 13 253 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1466 Mal-Chr4 22338405 22339646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1466 1 254 PP2C-type Phosphatase Gene Family AT3G15260 73.228 1.71e-142 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1466 K17506 - gmx:100500617 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1466 4 22338405 22339646 Mal4g1466 4 22338405 22339646 ECH