Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1465 ATGGAGGGGAAGCCAATATCAGTTGAGAATGTGTGCAAAGAACACATAGTAGAAGAAATAGGAGCTGAAGAAGATGAGGATGGTGGTGTTGAAGATGATGAGAAGAAGAAGAAGAAGAAAGGTGTTTGTGTTAGTGGGAGAAAAGAGCCAAGTAGAGGTGGAAGATTTTCTCCACCTTTTTGTCAAGTAGAAAGTTGTGGAGCTGATTTAACTTTTGCAAAGAGATATAATCGTCGCCATAAGGTTTGTCAGGTTCATTCCAAGGCATCTTTTGTGGTGGTTGCAGGGCTAAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGAGCTTGCGGAGTTTGATGAAGCTAAAAGAAGCTGCCGAAGACGCTTAGCGCGACACAATGAACGGCGTCGTAAAAGCAATGCTGGAACTTGCAATGAAGGAAGCAGTACTGGCCAACAAAAGAATGATGGTGATTGGAGACAAATTCATATGAACATGACAAGCACTTCTGGTCACGAGTTTCTGAATTTCAGATGA 525 0.4305 MEGKPISVENVCKEHIVEEIGAEEDEDGGVEDDEKKKKKKGVCVSGRKEPSRGGRFSPPFCQVESCGADLTFAKRYNRRHKVCQVHSKASFVVVAGLRQRFCQQCSRFHELAEFDEAKRSCRRRLARHNERRRKSNAGTCNEGSSTGQQKNDGDWRQIHMNMTSTSGHEFLNFR* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1465 174 MobiDBLite consensus disorder prediction 132 154 - -
Mal4g1465 174 ProSiteProfiles Zinc finger SBP-type profile. 58 135 IPR004333 GO:0003677
Mal4g1465 174 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 26 153 - -
Mal4g1465 174 MobiDBLite consensus disorder prediction 138 154 - -
Mal4g1465 174 Gene3D - 52 122 IPR036893 GO:0003677|GO:0005634
Mal4g1465 174 MobiDBLite consensus disorder prediction 17 53 - -
Mal4g1465 174 Pfam SBP domain 61 134 IPR004333 GO:0003677
Mal4g1465 174 MobiDBLite consensus disorder prediction 31 46 - -
Mal4g1465 174 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 26 153 IPR044817 GO:0003677
Mal4g1465 174 SUPERFAMILY SBT domain 59 138 IPR036893 GO:0003677|GO:0005634
Mal4g1465 174 Coils Coil 111 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1465 Mal-Chr4 22329628 22332109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1465 55 144 SBP-box Gene Family AT3G15270 67.778 4.09e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mal4g1465 SBP 2.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1465 - - mtr:MTR_2g078770 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1465 4 22329628 22332109 Mal4g4055 4 116238354 116240383 ECH
Mal4g1465 4 22329628 22332109 Mal7g3535 7 100471819 100474787 ECH
Mal4g1465 4 22329628 22332109 Mal4g1465 4 22329628 22332109 ECH