Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1463 ATGGTCCATGTTCCACTTTCTTTTCTGTTTAGAGGGGTATCCTATCTCTTTCTTCAAGTAATGGTGTTACTCAGATGTTTCTGGTTGACACTAGTTCAATGTTGTGTCTTGTCTTGCTTTTTTTGTTTGTCTTTGAGTCTTGAAAATGGAACAAAATCATGTGATCCTAGAGATTTATCAGCTCTGAAGGAGTTTGCAGGAAACCTTACAAATGGTTCAGTTATCAAATCATGGTCCAATGATAGTGTTTGCTGCAATTGGATTGGAGTTGTGTGTGGTGGTGATAATGGAGAAGATGTTAATAGAGTGACCAAGTTGATCCTTTCTGAAATGAGTCTCAATGGAACAATTTCACCCTCTTTAGCAAAACTAGATCAACTCAATGTGTTGAATCTTTCATTCAATCATCTTCATGGTGGATTGCCTTTGGAATTATCAAAGTTGAAGATGTTGAAGTTTCTTGATTTGAGCTATAACATGCTGTCAGGACCTGTTGCTGAGACACTTTCTGGTTTGAAGTCCATTGAAGTGTTGAATATTTCAAGTAATTCATTTTCTAGAGAGTTTTTCCACCTTGTGGAATTTCCTCATCTACTTGCTCTCAATGTGAGTAATAATTCATTCACTGGTAGATTCAGTTCTCAAATTTGCAATTCTTCCAAGGTTTTTCACACACTTGATTTATCTTTAAATCATTTTAGTGGTGACCTTGAAGGTTTGAATTTGAACAACTGCACTAAATCTCTCCAAAGGTTGCATTTGGATTCCAATTCATTTTCTGGCCTTCTTCCAGAGTCATTGTTTTCAATGTTATCCTTGAAACAATTATCAATCTCTGGAAACAATTTTTCTGGCAAGTTAAGCAATGAGTTAAGTAAGCTTTCTAGCCTAAAATCTCTTGTGGTTTCTGCGAACCGTTTTTCAGGCGAAATTCCAAATGTGTTTGAGAATCTTTTGCAACTAGAACAATTAGTAGCACATGCTAATTCATTTTCTGGACCATTACCTTCCACTTTGGCTCTATGCTCTAAGCTTAGAGTGCTTGATCTTAAAAATAACTCATTGTCAGGTTCAATTGATCTTGATTTCACTGGATTAACCAGTCTTTGTTCACTTGATCTTGCTAGCAATCATTTTACTGGACCACTACCTAGTTCATTGTCCTATTGTCATGAATTGAAAGTTTTAAGCCTTGCTAGGAATGGTTTAAATGGTTCTATACCTGAAAGCTATGCCAAATTATCTTCTCTTTTGTTTGTATCATTTTCAAACAACAGCTTAGTGAATTTATCCGGTGCACTTTCTGTTCTTCAGAAGTGCAAAAATCTCACAACTCTTATCCTCACTAAAAATTTCCACAGAGAAGAAATTCCACAGAATTTACTCCCAGCAGGATTTGAGAGTCTTATGGTGTTAGCACTCGGAAACTGCGGTCTTAAAAGTTATATTCCTTCTTGGCTATTAAAATGCAAGAAATTGGCGGTACTTGATTTGTCTTGGAACTCATTGAATGGTAGTATTCCTTCATGGATCGGTGAAATGGACAGTTTGTTCTATTTGGATTTCTCGAATAATTCTCTCACAGGTGAAATACCGAAAAGTTTGACTGAGTTTAAGGGACTCACTTGCTCAAATTGTGGAAGACCAAATTTTGCTTCTTATGCTTTCATTCCTCTCTTTGTTAAGAGAAATACTAGTGCTAGTGGATTGCAATATAATCAAGCTTCAAGTTTCCCTCCTTCAATTTTATTGAGCAATAACATGTTAAATGGAAGTATATGGCCCGAAATCGGTAATTTGAAGGCACTGCATGTCTTGGATTTCAGCAGGAACAACATCAGTGGTGAAATTCCTAGCACTATTTCAGAGATGGAGAATTTGGAAACATTGGATTTGTCTTATAATGATCTCTCTGGAATAATCCCTCCCTCATTTAACAACCTCACATTCTTGTCAAAGTTTAGTGTGGCGCATAATCACTTGCAAGGACTGATTCCAAGTGGAGGGCAGTTTTTAAGCTTCCCTGGTTCAAGCTTTGAGGGAAATTTGGGACTTTGCAGGGATAATGATATTGATAACACTCCTTGCAAAGTTGTTAACAATATGAGGCCAAATCTGTCTTCTAATTCATCAAGAAAATTTAGTAGAAGCAATGTACTTGGCATAACAATCAGCATCGGGATAGGGCTTGCTTTGTTGCTTGCAATTATTGTGGTAAGAATGTCAAAGAGGAAAGAAGATAAACCTATTGATAGCTTTGATGAGGAGATGAATGGTAGGCGGTCACACAGGTTATCATCTGAAGCACTTGTTTCCTCGAAATTGGTGCTTTTTCAGAATTCAGATTGCAAGGATCTCACGGTTACAGATTTGTTGAAAGCCACAAACAATTTCAACCAGGCGAACATTGTCGGTTGTGGTGGCTTCGGTCTTGTTTACAAGGCGTATCTTCCAAACGGCATGAAAGCGGCTGTCAAGAGGCTTTCTGGCGACTGCGGTCAGATGGAACGCGAATTCCAAGCCGAAGTCGAAGCCCTCTCGAGAGCTCAACACAAGAACCTTGTTTCTCTTAAAGGCTATTGTCGGCATGACAATGACCGGTTGCTAATTTACTCGTACATGGAGAATGGTAGCTTGGATTATTGGCTTCACGAGTGTGTGGATGGAAGTTCTGCTCTGAATTGGGATATACGACTCAAGATTGCAAAAGGCGCGGCTCGTGGATTAGCTTACTTGCACAAGGATTGTGAACCGTACATTGTGCACCGTGACATTAAATCTAGCAACATACTTTTGGATGATAAGTTTGAAGCTCATTTGGCTGATTTTGGTCTCTCAAGACTACTTTCACCGTACGATACTCATGTCACAACAGACTTAGTAGGCACTTTAGGATATATTCCTCCAGAATATAGTCAGACACTGATGGCAACGTTCCGTGGTGATGTCTATAGTTTCGGCGTTGTTCTTCTTGAGCTTCTTACCGGTAGAAGGCCAGTGGAAGTCATCAAGGGGAAAAATTGCAGGAATCTTGTGTCTTGGGTTTATCAGATGAAATATGAAAATAAGGAGCAGGAAATTTTTGATCAAGCCATTTGGGAGAAGGAAAGGGAGAAACAACTATTGGAGGTGCTTTCCATTGCTTGTAAATGTCTTGATCAAGATCCAAGGCAAAGGCCTTCTATTGAAATGGTTGTTTCATGGCTTGATAGTGTAAGATTTGATGGCTTTCAACAATGA 3240 0.3861 MVHVPLSFLFRGVSYLFLQVMVLLRCFWLTLVQCCVLSCFFCLSLSLENGTKSCDPRDLSALKEFAGNLTNGSVIKSWSNDSVCCNWIGVVCGGDNGEDVNRVTKLILSEMSLNGTISPSLAKLDQLNVLNLSFNHLHGGLPLELSKLKMLKFLDLSYNMLSGPVAETLSGLKSIEVLNISSNSFSREFFHLVEFPHLLALNVSNNSFTGRFSSQICNSSKVFHTLDLSLNHFSGDLEGLNLNNCTKSLQRLHLDSNSFSGLLPESLFSMLSLKQLSISGNNFSGKLSNELSKLSSLKSLVVSANRFSGEIPNVFENLLQLEQLVAHANSFSGPLPSTLALCSKLRVLDLKNNSLSGSIDLDFTGLTSLCSLDLASNHFTGPLPSSLSYCHELKVLSLARNGLNGSIPESYAKLSSLLFVSFSNNSLVNLSGALSVLQKCKNLTTLILTKNFHREEIPQNLLPAGFESLMVLALGNCGLKSYIPSWLLKCKKLAVLDLSWNSLNGSIPSWIGEMDSLFYLDFSNNSLTGEIPKSLTEFKGLTCSNCGRPNFASYAFIPLFVKRNTSASGLQYNQASSFPPSILLSNNMLNGSIWPEIGNLKALHVLDFSRNNISGEIPSTISEMENLETLDLSYNDLSGIIPPSFNNLTFLSKFSVAHNHLQGLIPSGGQFLSFPGSSFEGNLGLCRDNDIDNTPCKVVNNMRPNLSSNSSRKFSRSNVLGITISIGIGLALLLAIIVVRMSKRKEDKPIDSFDEEMNGRRSHRLSSEALVSSKLVLFQNSDCKDLTVTDLLKATNNFNQANIVGCGGFGLVYKAYLPNGMKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHDNDRLLIYSYMENGSLDYWLHECVDGSSALNWDIRLKIAKGAARGLAYLHKDCEPYIVHRDIKSSNILLDDKFEAHLADFGLSRLLSPYDTHVTTDLVGTLGYIPPEYSQTLMATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVSWVYQMKYENKEQEIFDQAIWEKEREKQLLEVLSIACKCLDQDPRQRPSIEMVVSWLDSVRFDGFQQ* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1463 1079 PRINTS Leucine-rich repeat signature 151 164 - -
Mal4g1463 1079 PRINTS Leucine-rich repeat signature 624 637 - -
Mal4g1463 1079 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 638 1072 - -
Mal4g1463 1079 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 483 539 - -
Mal4g1463 1079 Gene3D Ribonuclease Inhibitor 57 174 IPR032675 -
Mal4g1463 1079 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 197 303 - -
Mal4g1463 1079 Pfam Leucine rich repeat 468 527 IPR001611 GO:0005515
Mal4g1463 1079 Pfam Leucine rich repeat 602 661 IPR001611 GO:0005515
Mal4g1463 1079 Pfam Leucine rich repeat 248 307 IPR001611 GO:0005515
Mal4g1463 1079 ProSitePatterns Protein kinases ATP-binding region signature. 804 826 IPR017441 GO:0005524
Mal4g1463 1079 PANTHER PHYTOSULFOKINE RECEPTOR 2 197 303 - -
Mal4g1463 1079 PANTHER PHYTOSULFOKINE RECEPTOR 2 303 463 - -
Mal4g1463 1079 PANTHER PHYTOSULFOKINE RECEPTOR 2 638 1072 - -
Mal4g1463 1079 SUPERFAMILY L domain-like 244 532 - -
Mal4g1463 1079 ProSitePatterns Serine/Threonine protein kinases active-site signature. 920 932 IPR008271 GO:0004672|GO:0006468
Mal4g1463 1079 CDD STKc_IRAK 804 1070 - -
Mal4g1463 1079 SMART serkin_6 798 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1463 1079 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 51 185 - -
Mal4g1463 1079 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 582 640 - -
Mal4g1463 1079 Gene3D Phosphorylase Kinase; domain 1 757 873 - -
Mal4g1463 1079 SUPERFAMILY L domain-like 466 667 - -
Mal4g1463 1079 Gene3D Transferase(Phosphotransferase) domain 1 874 1075 - -
Mal4g1463 1079 Gene3D Ribonuclease Inhibitor 188 428 IPR032675 -
Mal4g1463 1079 PANTHER PHYTOSULFOKINE RECEPTOR 2 51 185 - -
Mal4g1463 1079 PANTHER PHYTOSULFOKINE RECEPTOR 2 582 640 - -
Mal4g1463 1079 Gene3D Ribonuclease Inhibitor 429 702 IPR032675 -
Mal4g1463 1079 ProSiteProfiles Protein kinase domain profile. 798 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g1463 1079 ProSiteProfiles Leucine-rich repeat profile. 626 647 IPR001611 GO:0005515
Mal4g1463 1079 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 303 463 - -
Mal4g1463 1079 SUPERFAMILY Protein kinase-like (PK-like) 780 1069 IPR011009 -
Mal4g1463 1079 SUPERFAMILY L domain-like 54 324 - -
Mal4g1463 1079 Pfam Leucine rich repeat N-terminal domain 57 92 IPR013210 -
Mal4g1463 1079 PANTHER PHYTOSULFOKINE RECEPTOR 2 483 539 - -
Mal4g1463 1079 SMART LRR_typ_2 366 390 IPR003591 -
Mal4g1463 1079 SMART LRR_typ_2 294 317 IPR003591 -
Mal4g1463 1079 SMART LRR_typ_2 624 647 IPR003591 -
Mal4g1463 1079 SMART LRR_typ_2 246 269 IPR003591 -
Mal4g1463 1079 SMART LRR_typ_2 414 437 IPR003591 -
Mal4g1463 1079 SMART LRR_typ_2 148 171 IPR003591 -
Mal4g1463 1079 Pfam Protein kinase domain 799 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1463 Mal-Chr4 22218461 22221925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1463 39 1075 Receptor kinase-like Gene Family AT1G55610 34.054 1.95e-163 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mal4g1463 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1463 - - mtr:MTR_2g078810 1860.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1463 4 22218461 22221925 Mal4g1463 4 22218461 22221925 ECH